RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
CCDC84-210ENST00000583842 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
CCDC84-210ENST00000583842 ABCC9O60706 1549 aa23.89■■□□□ 1.41
CCDC84-210ENST00000583842 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
CCDC84-210ENST00000583842 NACADO15069 1562 aa22.97■■□□□ 1.27
CCDC84-210ENST00000583842 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
CCDC84-210ENST00000583842 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
CCDC84-210ENST00000583842 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
CCDC84-210ENST00000583842 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
CCDC84-210ENST00000583842 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
CCDC84-210ENST00000583842 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
CCDC84-210ENST00000583842 UNC13AQ9UPW8 1703 aa22.23■■□□□ 1.15
CCDC84-210ENST00000583842 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
CCDC84-210ENST00000583842 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
CCDC84-210ENST00000583842 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
CCDC84-210ENST00000583842 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
CCDC84-210ENST00000583842 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
CCDC84-210ENST00000583842 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
CCDC84-210ENST00000583842 NCAPD3P42695 1498 aa21.27■■□□□ 1
CCDC84-210ENST00000583842 ATAD2BQ9ULI0 1458 aa21.15■□□□□ 0.98
CCDC84-210ENST00000583842 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.97
CCDC84-210ENST00000583842 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
CCDC84-210ENST00000583842 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
CCDC84-210ENST00000583842 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.96
CCDC84-210ENST00000583842 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
CCDC84-210ENST00000583842 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
CCDC84-210ENST00000583842 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
CCDC84-210ENST00000583842 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
CCDC84-210ENST00000583842 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
CCDC84-210ENST00000583842 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
CCDC84-210ENST00000583842 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
CCDC84-210ENST00000583842 CUX2O14529 1486 aa20.62■□□□□ 0.89
CCDC84-210ENST00000583842 WIZO95785 1651 aa20.6■□□□□ 0.89
CCDC84-210ENST00000583842 NESP48681 1621 aa20.59■□□□□ 0.89
CCDC84-210ENST00000583842 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
CCDC84-210ENST00000583842 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
CCDC84-210ENST00000583842 CFTRP13569 1480 aa20.42■□□□□ 0.86
CCDC84-210ENST00000583842 DNAJC5Q9H3Z4 198 aa20.35■□□□□ 0.85
CCDC84-210ENST00000583842 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
CCDC84-210ENST00000583842 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
CCDC84-210ENST00000583842 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
CCDC84-210ENST00000583842 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.84
CCDC84-210ENST00000583842 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
CCDC84-210ENST00000583842 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
CCDC84-210ENST00000583842 WDR62O43379 1518 aa20.2■□□□□ 0.82
CCDC84-210ENST00000583842 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
CCDC84-210ENST00000583842 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
CCDC84-210ENST00000583842 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
CCDC84-210ENST00000583842 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
CCDC84-210ENST00000583842 IFT140Q96RY7 1462 aa19.91■□□□□ 0.78
CCDC84-210ENST00000583842 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
CCDC84-210ENST00000583842 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
CCDC84-210ENST00000583842 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
CCDC84-210ENST00000583842 SOGA1O94964 1423 aa19.73■□□□□ 0.75
CCDC84-210ENST00000583842 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
CCDC84-210ENST00000583842 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
CCDC84-210ENST00000583842 TARBP1Q13395 1621 aaKnown RBP19.67■□□□□ 0.74
CCDC84-210ENST00000583842 CUX1P39880 1505 aa19.63■□□□□ 0.73
CCDC84-210ENST00000583842 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.734e-7■■■■■ 35.5
CCDC84-210ENST00000583842 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
CCDC84-210ENST00000583842 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
CCDC84-210ENST00000583842 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
CCDC84-210ENST00000583842 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
CCDC84-210ENST00000583842 EIF4G3O43432 1585 aaKnown RBP19.54■□□□□ 0.72
CCDC84-210ENST00000583842 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.72
CCDC84-210ENST00000583842 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
CCDC84-210ENST00000583842 GRIN2BQ13224 1484 aa19.49■□□□□ 0.71
CCDC84-210ENST00000583842 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
CCDC84-210ENST00000583842 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
CCDC84-210ENST00000583842 FBLN2P98095 1184 aa19.45■□□□□ 0.7
CCDC84-210ENST00000583842 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
CCDC84-210ENST00000583842 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
CCDC84-210ENST00000583842 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
CCDC84-210ENST00000583842 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
CCDC84-210ENST00000583842 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
CCDC84-210ENST00000583842 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
CCDC84-210ENST00000583842 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
CCDC84-210ENST00000583842 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
CCDC84-210ENST00000583842 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
CCDC84-210ENST00000583842 CHD1O14646 1710 aa19.28■□□□□ 0.68
CCDC84-210ENST00000583842 FHAD1B1AJZ9 1412 aa19.26■□□□□ 0.67
CCDC84-210ENST00000583842 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
CCDC84-210ENST00000583842 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
CCDC84-210ENST00000583842 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
CCDC84-210ENST00000583842 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
CCDC84-210ENST00000583842 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
CCDC84-210ENST00000583842 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
CCDC84-210ENST00000583842 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
CCDC84-210ENST00000583842 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
CCDC84-210ENST00000583842 IGF1RP08069 1367 aa19.18■□□□□ 0.66
CCDC84-210ENST00000583842 NUP160Q12769 1436 aa19.17■□□□□ 0.66
CCDC84-210ENST00000583842 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
CCDC84-210ENST00000583842 ADAMTS12P58397 1594 aa19.11■□□□□ 0.65
CCDC84-210ENST00000583842 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
CCDC84-210ENST00000583842 JPH4Q96JJ6 628 aa19.08■□□□□ 0.64
CCDC84-210ENST00000583842 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
CCDC84-210ENST00000583842 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
CCDC84-210ENST00000583842 KIAA0586Q9BVV6 1533 aa18.97■□□□□ 0.63
CCDC84-210ENST00000583842 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
CCDC84-210ENST00000583842 CUL7Q14999 1698 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms