RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 DCAF8L2P0C7V8 631 aa9.37□□□□□ -0.91
CKAP5-202ENST00000354558 FAM9AQ8IZU1 332 aaPredicted RBP8.62□□□□□ -1.03
CKAP5-202ENST00000354558 EHMT2Q96KQ7 1210 aa8.36□□□□□ -1.07
CKAP5-202ENST00000354558 MYT1LQ9UL68 1186 aa8.25□□□□□ -1.09
CKAP5-202ENST00000354558 APLP2Q06481 763 aa8.23□□□□□ -1.09
CKAP5-202ENST00000354558 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
CKAP5-202ENST00000354558 ATP1B4Q9UN42 357 aaPredicted RBP8.21□□□□□ -1.1
CKAP5-202ENST00000354558 RANGAP1P46060 587 aaPredicted RBP8.13□□□□□ -1.11
CKAP5-202ENST00000354558 TTBK1Q5TCY1 1321 aaPredicted RBP8.12□□□□□ -1.11
CKAP5-202ENST00000354558 CHIC1Q5VXU3 224 aa8.11□□□□□ -1.11
CKAP5-202ENST00000354558 SHROOM4Q9ULL8 1493 aa8.11□□□□□ -1.11
CKAP5-202ENST00000354558 NISCHQ9Y2I1 1504 aa8.01□□□□□ -1.13
CKAP5-202ENST00000354558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.98□□□□□ -1.13
CKAP5-202ENST00000354558 HNRNPUL2Q1KMD3 747 aaKnown RBP7.98□□□□□ -1.13
CKAP5-202ENST00000354558 PELP1Q8IZL8 1130 aaKnown RBP7.86□□□□□ -1.15
CKAP5-202ENST00000354558 SLC4A1APQ9BWU0 796 aaKnown RBP7.86□□□□□ -1.15
CKAP5-202ENST00000354558 PLPPR3Q6T4P5 718 aa7.82□□□□□ -1.16
CKAP5-202ENST00000354558 BCANQ96GW7 911 aa7.8□□□□□ -1.16
CKAP5-202ENST00000354558 UBTFP17480 764 aaKnown RBP7.73□□□□□ -1.17
CKAP5-202ENST00000354558 FBLN2P98095 1184 aa7.73□□□□□ -1.17
CKAP5-202ENST00000354558 POLR3GLQ9BT43 218 aa7.73□□□□□ -1.17
CKAP5-202ENST00000354558 SLC24A1O60721 1099 aa7.7□□□□□ -1.18
CKAP5-202ENST00000354558 ESF1Q9H501 851 aaKnown RBP7.69□□□□□ -1.18
CKAP5-202ENST00000354558 ERICH6Q7L0X2 663 aa7.65□□□□□ -1.19
CKAP5-202ENST00000354558 TRIM41Q8WV44 630 aa7.59□□□□□ -1.19
CKAP5-202ENST00000354558 CNGB1Q14028 1251 aaPredicted RBP7.58□□□□□ -1.2
CKAP5-202ENST00000354558 SCAF1Q9H7N4 1312 aaKnown RBP7.58□□□□□ -1.2
CKAP5-202ENST00000354558 A0A0G2JS52 829 aa7.58□□□□□ -1.2
CKAP5-202ENST00000354558 CCER1Q8TC90 406 aaPredicted RBP7.57□□□□□ -1.2
CKAP5-202ENST00000354558 ITGAEP38570 1179 aa7.56□□□□□ -1.2
CKAP5-202ENST00000354558 PABPN1Q86U42 306 aaKnown RBP eCLIP7.54□□□□□ -1.2
CKAP5-202ENST00000354558 NPM1P06748 294 aaKnown RBP eCLIP7.54□□□□□ -1.2
CKAP5-202ENST00000354558 PCGF6Q9BYE7 350 aa7.53□□□□□ -1.2
CKAP5-202ENST00000354558 AEBP2Q6ZN18 517 aaPredicted RBP7.52□□□□□ -1.21
CKAP5-202ENST00000354558 STAG3Q9UJ98 1225 aa7.52□□□□□ -1.21
CKAP5-202ENST00000354558 TRHP20396 242 aaPredicted RBP7.48□□□□□ -1.21
CKAP5-202ENST00000354558 ABCC9O60706 1549 aa7.47□□□□□ -1.21
CKAP5-202ENST00000354558 DAXXQ9UER7 740 aaPredicted RBP7.46□□□□□ -1.22
CKAP5-202ENST00000354558 SENP3Q9H4L4 574 aaPredicted RBP7.45□□□□□ -1.22
CKAP5-202ENST00000354558 NEFLP07196 543 aa7.44□□□□□ -1.22
CKAP5-202ENST00000354558 HAP1P54257 671 aaPredicted RBP7.42□□□□□ -1.22
CKAP5-202ENST00000354558 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
CKAP5-202ENST00000354558 PLEKHG5O94827 1062 aa7.42□□□□□ -1.22
CKAP5-202ENST00000354558 ZBTB47Q9UFB7 747 aaPredicted RBP7.41□□□□□ -1.22
CKAP5-202ENST00000354558 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
CKAP5-202ENST00000354558 C14orf37Q86TY3 774 aa7.4□□□□□ -1.22
CKAP5-202ENST00000354558 ARID3CA6NKF2 412 aa7.39□□□□□ -1.23
CKAP5-202ENST00000354558 MYT1Q01538 1121 aa7.39□□□□□ -1.23
CKAP5-202ENST00000354558 ARID4BQ4LE39 1312 aaPredicted RBP7.39□□□□□ -1.23
CKAP5-202ENST00000354558 ZBTB7CA1YPR0 619 aa7.39□□□□□ -1.23
CKAP5-202ENST00000354558 NEFMP07197 916 aa7.39□□□□□ -1.23
CKAP5-202ENST00000354558 CHGAP10645 457 aaKnown RBP7.38□□□□□ -1.23
CKAP5-202ENST00000354558 CLSPNQ9HAW4 1339 aa7.36□□□□□ -1.23
CKAP5-202ENST00000354558 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
CKAP5-202ENST00000354558 FAM50AQ14320 339 aaKnown RBP7.35□□□□□ -1.23
CKAP5-202ENST00000354558 ZNF326Q5BKZ1 582 aaKnown RBP7.34□□□□□ -1.23
CKAP5-202ENST00000354558 NPM2Q86SE8 214 aaKnown RBP7.32□□□□□ -1.24
CKAP5-202ENST00000354558 ZNF777Q9ULD5 760 aaPredicted RBP7.32□□□□□ -1.24
CKAP5-202ENST00000354558 NPHP1O15259 732 aa7.28□□□□□ -1.24
CKAP5-202ENST00000354558 YTHDC1Q96MU7 727 aaKnown RBP7.28□□□□□ -1.24
CKAP5-202ENST00000354558 CANXP27824 592 aaKnown RBP7.25□□□□□ -1.25
CKAP5-202ENST00000354558 ZNF316A6NFI3 1004 aaPredicted RBP7.24□□□□□ -1.25
CKAP5-202ENST00000354558 PPP1R15AO75807 674 aaPredicted RBP7.24□□□□□ -1.25
CKAP5-202ENST00000354558 ARXQ96QS3 562 aa7.24□□□□□ -1.25
CKAP5-202ENST00000354558 DCAF8L1A6NGE4 600 aa7.24□□□□□ -1.25
CKAP5-202ENST00000354558 CENPBP07199 599 aaPredicted RBP7.23□□□□□ -1.25
CKAP5-202ENST00000354558 PHF23Q9BUL5 403 aaPredicted RBP7.22□□□□□ -1.25
CKAP5-202ENST00000354558 P3H3Q8IVL6 736 aa7.2□□□□□ -1.26
CKAP5-202ENST00000354558 TULP1O00294 542 aaPredicted RBP7.18□□□□□ -1.26
CKAP5-202ENST00000354558 LMOD2Q6P5Q4 547 aa7.18□□□□□ -1.26
CKAP5-202ENST00000354558 CDK11AQ9UQ88 783 aaPredicted RBP7.18□□□□□ -1.26
CKAP5-202ENST00000354558 CHMP7Q8WUX9 453 aaPredicted RBP7.17□□□□□ -1.26
CKAP5-202ENST00000354558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.16□□□□□ -1.261e-6■■■■□ 21.9
CKAP5-202ENST00000354558 ERCC6Q03468 1493 aa7.16□□□□□ -1.26
CKAP5-202ENST00000354558 NEUROD1Q13562 356 aa7.16□□□□□ -1.26
CKAP5-202ENST00000354558 CDK11BP21127 795 aaKnown RBP7.14□□□□□ -1.27
CKAP5-202ENST00000354558 CCDC9Q9Y3X0 531 aaKnown RBP7.13□□□□□ -1.27
CKAP5-202ENST00000354558 ZEB1P37275 1124 aaPredicted RBP7.13□□□□□ -1.27
CKAP5-202ENST00000354558 NCBP3Q53F19 620 aaKnown RBP7.13□□□□□ -1.27
CKAP5-202ENST00000354558 KCNH8Q96L42 1107 aa7.13□□□□□ -1.27
CKAP5-202ENST00000354558 MEX3CQ5U5Q3 659 aaKnown RBP7.11□□□□□ -1.27
CKAP5-202ENST00000354558 KRI1Q8N9T8 703 aaKnown RBP7.09□□□□□ -1.27
CKAP5-202ENST00000354558 MLECQ14165 292 aa7.08□□□□□ -1.28
CKAP5-202ENST00000354558 TMX4Q9H1E5 349 aaPredicted RBP7.06□□□□□ -1.28
CKAP5-202ENST00000354558 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.04□□□□□ -1.28
CKAP5-202ENST00000354558 FOXD1Q16676 465 aa7.03□□□□□ -1.28
CKAP5-202ENST00000354558 KLHL34Q8N239 644 aa7.03□□□□□ -1.28
CKAP5-202ENST00000354558 GOLGA2Q08379 1002 aa7.02□□□□□ -1.28
CKAP5-202ENST00000354558 CLSTN1O94985 981 aa7.01□□□□□ -1.29
CKAP5-202ENST00000354558 ISY1Q9ULR0 285 aaKnown RBP6.99□□□□□ -1.29
CKAP5-202ENST00000354558 MSH5O43196 834 aa6.98□□□□□ -1.29
CKAP5-202ENST00000354558 G3V3G9 751 aa6.97□□□□□ -1.29
CKAP5-202ENST00000354558 DCAF8Q5TAQ9 597 aa6.97□□□□□ -1.29
CKAP5-202ENST00000354558 TSPY4P0CV99 314 aa6.96□□□□□ -1.29
CKAP5-202ENST00000354558 TSPY10P0CW01 314 aa6.96□□□□□ -1.29
CKAP5-202ENST00000354558 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.31e-6■□□□□ 9.4
CKAP5-202ENST00000354558 PPM1GO15355 546 aaPredicted RBP6.93□□□□□ -1.3
CKAP5-202ENST00000354558 HSP90AA1P07900 732 aaKnown RBP6.93□□□□□ -1.3
CKAP5-202ENST00000354558 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
CKAP5-202ENST00000354558 RTL5Q5HYW3 569 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms