RNA–Protein interactions for RNA: ENST00000529230.5

CKAP5-210, Transcript of cytoskeleton associated protein 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CKAP5, Length 7,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-210ENST00000529230 DCAF8L2P0C7V8 631 aa10.45□□□□□ -0.74
CKAP5-210ENST00000529230 NISCHQ9Y2I1 1504 aa10.31□□□□□ -0.76
CKAP5-210ENST00000529230 ABCC9O60706 1549 aa9.7□□□□□ -0.86
CKAP5-210ENST00000529230 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
CKAP5-210ENST00000529230 SHROOM4Q9ULL8 1493 aa9.29□□□□□ -0.92
CKAP5-210ENST00000529230 SUPT5HO00267 1087 aaKnown RBP8.99□□□□□ -0.97
CKAP5-210ENST00000529230 RB1CC1Q8TDY2 1594 aa8.87□□□□□ -0.99
CKAP5-210ENST00000529230 CCDC180Q9P1Z9 1646 aa8.8□□□□□ -1
CKAP5-210ENST00000529230 TTBK1Q5TCY1 1321 aaPredicted RBP8.79□□□□□ -1
CKAP5-210ENST00000529230 FBLN2P98095 1184 aa8.78□□□□□ -1
CKAP5-210ENST00000529230 FAM9AQ8IZU1 332 aaPredicted RBP8.77□□□□□ -1
CKAP5-210ENST00000529230 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
CKAP5-210ENST00000529230 EHMT2Q96KQ7 1210 aa8.76□□□□□ -1.01
CKAP5-210ENST00000529230 TRIM41Q8WV44 630 aa8.73□□□□□ -1.01
CKAP5-210ENST00000529230 ERCC6Q03468 1493 aa8.7□□□□□ -1.02
CKAP5-210ENST00000529230 DNAJC5BQ9UF47 199 aa8.67□□□□□ -1.02
CKAP5-210ENST00000529230 RANGAP1P46060 587 aaPredicted RBP8.66□□□□□ -1.02
CKAP5-210ENST00000529230 NACADO15069 1562 aa8.65□□□□□ -1.03
CKAP5-210ENST00000529230 CECR2Q9BXF3 1484 aa8.61□□□□□ -1.03
CKAP5-210ENST00000529230 TRHP20396 242 aaPredicted RBP8.6□□□□□ -1.03
CKAP5-210ENST00000529230 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
CKAP5-210ENST00000529230 MYT1LQ9UL68 1186 aa8.55□□□□□ -1.04
CKAP5-210ENST00000529230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.53□□□□□ -1.04
CKAP5-210ENST00000529230 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
CKAP5-210ENST00000529230 AEBP2Q6ZN18 517 aaPredicted RBP8.48□□□□□ -1.05
CKAP5-210ENST00000529230 ZCCHC6Q5VYS8 1495 aaKnown RBP8.44□□□□□ -1.06
CKAP5-210ENST00000529230 NPM1P06748 294 aaKnown RBP eCLIP8.43□□□□□ -1.06
CKAP5-210ENST00000529230 PLPPR3Q6T4P5 718 aa8.42□□□□□ -1.06
CKAP5-210ENST00000529230 CHMP7Q8WUX9 453 aaPredicted RBP8.4□□□□□ -1.07
CKAP5-210ENST00000529230 BAZ1BQ9UIG0 1483 aaKnown RBP8.37□□□□□ -1.07
CKAP5-210ENST00000529230 CHIC1Q5VXU3 224 aa8.36□□□□□ -1.07
CKAP5-210ENST00000529230 UBTFP17480 764 aaKnown RBP8.31□□□□□ -1.08
CKAP5-210ENST00000529230 APLP2Q06481 763 aa8.3□□□□□ -1.08
CKAP5-210ENST00000529230 ARID3CA6NKF2 412 aa8.3□□□□□ -1.08
CKAP5-210ENST00000529230 CYB5RLQ6IPT4 315 aa8.28□□□□□ -1.08
CKAP5-210ENST00000529230 OSCARQ8IYS5 282 aa8.28□□□□□ -1.08
CKAP5-210ENST00000529230 PDS5BQ9NTI5 1447 aa8.28□□□□□ -1.08
CKAP5-210ENST00000529230 CC2D2AQ9P2K1 1620 aa8.26□□□□□ -1.09
CKAP5-210ENST00000529230 SMARCA2P51531 1590 aa8.25□□□□□ -1.09
CKAP5-210ENST00000529230 EIF4G1Q04637 1599 aaKnown RBP8.22□□□□□ -1.09
CKAP5-210ENST00000529230 ESF1Q9H501 851 aaKnown RBP8.18□□□□□ -1.1
CKAP5-210ENST00000529230 P3H3Q8IVL6 736 aa8.17□□□□□ -1.1
CKAP5-210ENST00000529230 ARID4BQ4LE39 1312 aaPredicted RBP8.16□□□□□ -1.1
CKAP5-210ENST00000529230 KCNH8Q96L42 1107 aa8.13□□□□□ -1.11
CKAP5-210ENST00000529230 DCAF1Q9Y4B6 1507 aa8.13□□□□□ -1.11
CKAP5-210ENST00000529230 BAZ1AQ9NRL2 1556 aaPredicted RBP8.12□□□□□ -1.11
CKAP5-210ENST00000529230 MYO15BQ96JP2 1530 aa8.11□□□□□ -1.11
CKAP5-210ENST00000529230 CADPSQ9ULU8 1353 aa8.11□□□□□ -1.11
CKAP5-210ENST00000529230 ATAD2BQ9ULI0 1458 aa8.1□□□□□ -1.11
CKAP5-210ENST00000529230 CEP164Q9UPV0 1460 aa8.1□□□□□ -1.11
CKAP5-210ENST00000529230 NESP48681 1621 aa8.08□□□□□ -1.12
CKAP5-210ENST00000529230 DNAJC5Q9H3Z4 198 aa8.08□□□□□ -1.12
CKAP5-210ENST00000529230 BCANQ96GW7 911 aa8.07□□□□□ -1.12
CKAP5-210ENST00000529230 TDRD9Q8NDG6 1382 aaKnown RBP8.05□□□□□ -1.12
CKAP5-210ENST00000529230 ZNF777Q9ULD5 760 aaPredicted RBP8.03□□□□□ -1.12
CKAP5-210ENST00000529230 FANCD2Q9BXW9 1451 aa8.02□□□□□ -1.12
CKAP5-210ENST00000529230 BICRAQ9NZM4 1560 aa8.02□□□□□ -1.12
CKAP5-210ENST00000529230 SENP3Q9H4L4 574 aaPredicted RBP8.02□□□□□ -1.13
CKAP5-210ENST00000529230 MROH2BQ7Z745 1585 aa8□□□□□ -1.13
CKAP5-210ENST00000529230 NCAPD3P42695 1498 aa8□□□□□ -1.13
CKAP5-210ENST00000529230 SOGA1O94964 1423 aa7.99□□□□□ -1.13
CKAP5-210ENST00000529230 SCAF1Q9H7N4 1312 aaKnown RBP7.99□□□□□ -1.13
CKAP5-210ENST00000529230 RSF1Q96T23 1441 aaPredicted RBP7.99□□□□□ -1.13
CKAP5-210ENST00000529230 MLECQ14165 292 aa7.99□□□□□ -1.13
CKAP5-210ENST00000529230 MRC2Q9UBG0 1479 aa7.98□□□□□ -1.13
CKAP5-210ENST00000529230 FAM69CQ0P6D2 419 aa7.97□□□□□ -1.13
CKAP5-210ENST00000529230 SMARCA4P51532 1647 aa7.95□□□□□ -1.14
CKAP5-210ENST00000529230 ITGAEP38570 1179 aa7.94□□□□□ -1.14
CKAP5-210ENST00000529230 CDK11AQ9UQ88 783 aaPredicted RBP7.94□□□□□ -1.14
CKAP5-210ENST00000529230 STAG3Q9UJ98 1225 aa7.93□□□□□ -1.14
CKAP5-210ENST00000529230 CUX2O14529 1486 aa7.92□□□□□ -1.14
CKAP5-210ENST00000529230 AQRO60306 1485 aaKnown RBP eCLIP7.91□□□□□ -1.145e-7■■■■■ 27.6
CKAP5-210ENST00000529230 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
CKAP5-210ENST00000529230 CCDC88BA6NC98 1476 aa7.88□□□□□ -1.15
CKAP5-210ENST00000529230 PLEKHD1A6NEE1 506 aa7.88□□□□□ -1.15
CKAP5-210ENST00000529230 WIZO95785 1651 aa7.87□□□□□ -1.15
CKAP5-210ENST00000529230 JPH4Q96JJ6 628 aa7.86□□□□□ -1.15
CKAP5-210ENST00000529230 PPARGC1BQ86YN6 1023 aaKnown RBP7.86□□□□□ -1.15
CKAP5-210ENST00000529230 UNC13AQ9UPW8 1703 aa7.85□□□□□ -1.15
CKAP5-210ENST00000529230 CHGAP10645 457 aaKnown RBP7.84□□□□□ -1.15
CKAP5-210ENST00000529230 RAD54L2Q9Y4B4 1467 aa7.83□□□□□ -1.16
CKAP5-210ENST00000529230 CSRNP3Q8WYN3 585 aa7.83□□□□□ -1.16
CKAP5-210ENST00000529230 CARMIL2Q6F5E8 1435 aa7.83□□□□□ -1.16
CKAP5-210ENST00000529230 FAM50AQ14320 339 aaKnown RBP7.83□□□□□ -1.16
CKAP5-210ENST00000529230 IFT140Q96RY7 1462 aa7.82□□□□□ -1.16
CKAP5-210ENST00000529230 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
CKAP5-210ENST00000529230 ABCC8Q09428 1581 aa7.82□□□□□ -1.16
CKAP5-210ENST00000529230 KIF27Q86VH2 1401 aa7.81□□□□□ -1.16
CKAP5-210ENST00000529230 HMGXB3Q12766 1538 aa7.81□□□□□ -1.16
CKAP5-210ENST00000529230 TOP2AP11388 1531 aaKnown RBP7.81□□□□□ -1.16
CKAP5-210ENST00000529230 LAMC3Q9Y6N6 1575 aa7.79□□□□□ -1.16
CKAP5-210ENST00000529230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.79□□□□□ -1.161e-6■■■■□ 21.9
CKAP5-210ENST00000529230 PLEKHG5O94827 1062 aa7.77□□□□□ -1.17
CKAP5-210ENST00000529230 CARMIL1Q5VZK9 1371 aa7.77□□□□□ -1.17
CKAP5-210ENST00000529230 PTPRGP23470 1445 aa7.76□□□□□ -1.17
CKAP5-210ENST00000529230 TRIM52Q96A61 297 aa7.76□□□□□ -1.17
CKAP5-210ENST00000529230 SLC4A1APQ9BWU0 796 aaKnown RBP7.76□□□□□ -1.17
CKAP5-210ENST00000529230 GAPVD1Q14C86 1478 aa7.75□□□□□ -1.17
CKAP5-210ENST00000529230 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
CKAP5-210ENST00000529230 FGD5Q6ZNL6 1462 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms