RNA–Protein interactions for RNA: ENST00000544090.5

TAF1C-204, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, humanhuman

TSL 2

Gene TAF1C, Length 2,747 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1C-204ENST00000544090 NISCHQ9Y2I1 1504 aa33.83■■■■□ 3.01
TAF1C-204ENST00000544090 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
TAF1C-204ENST00000544090 SHROOM4Q9ULL8 1493 aa28.68■■■□□ 2.18
TAF1C-204ENST00000544090 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
TAF1C-204ENST00000544090 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
TAF1C-204ENST00000544090 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
TAF1C-204ENST00000544090 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
TAF1C-204ENST00000544090 ABCC9O60706 1549 aa27.24■■□□□ 1.95
TAF1C-204ENST00000544090 SCRIBQ14160 1630 aa27.09■■□□□ 1.93
TAF1C-204ENST00000544090 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
TAF1C-204ENST00000544090 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
TAF1C-204ENST00000544090 NACADO15069 1562 aa26.86■■□□□ 1.89
TAF1C-204ENST00000544090 RSF1Q96T23 1441 aaPredicted RBP26.62■■□□□ 1.85
TAF1C-204ENST00000544090 RB1CC1Q8TDY2 1594 aa26.53■■□□□ 1.84
TAF1C-204ENST00000544090 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
TAF1C-204ENST00000544090 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
TAF1C-204ENST00000544090 LOC105371045A0A1W2PR82 267 aa26.24■■□□□ 1.79
TAF1C-204ENST00000544090 WIZO95785 1651 aa26.12■■□□□ 1.77
TAF1C-204ENST00000544090 UNC13AQ9UPW8 1703 aa26.09■■□□□ 1.77
TAF1C-204ENST00000544090 TRIM41Q8WV44 630 aa26.06■■□□□ 1.76
TAF1C-204ENST00000544090 BAZ1AQ9NRL2 1556 aaPredicted RBP26.02■■□□□ 1.76
TAF1C-204ENST00000544090 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.755e-7■■■□□ 15.9
TAF1C-204ENST00000544090 FAM9AQ8IZU1 332 aaPredicted RBP25.93■■□□□ 1.74
TAF1C-204ENST00000544090 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
TAF1C-204ENST00000544090 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
TAF1C-204ENST00000544090 EHMT2Q96KQ7 1210 aa25.81■■□□□ 1.72
TAF1C-204ENST00000544090 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
TAF1C-204ENST00000544090 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
TAF1C-204ENST00000544090 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
TAF1C-204ENST00000544090 HRCP23327 699 aa25.57■■□□□ 1.68
TAF1C-204ENST00000544090 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
TAF1C-204ENST00000544090 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.67
TAF1C-204ENST00000544090 ABCC8Q09428 1581 aa25.4■■□□□ 1.66
TAF1C-204ENST00000544090 TRIM26Q12899 539 aaPredicted RBP25.39■■□□□ 1.66
TAF1C-204ENST00000544090 PELP1Q8IZL8 1130 aaKnown RBP25.37■■□□□ 1.65
TAF1C-204ENST00000544090 PEG3Q9GZU2 1588 aa25.33■■□□□ 1.65
TAF1C-204ENST00000544090 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
TAF1C-204ENST00000544090 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
TAF1C-204ENST00000544090 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
TAF1C-204ENST00000544090 SOGA1O94964 1423 aa25.09■■□□□ 1.61
TAF1C-204ENST00000544090 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
TAF1C-204ENST00000544090 RUSC2Q8N2Y8 1516 aa24.99■■□□□ 1.59
TAF1C-204ENST00000544090 CSRNP3Q8WYN3 585 aa24.94■■□□□ 1.58
TAF1C-204ENST00000544090 UBTFP17480 764 aaKnown RBP24.92■■□□□ 1.58
TAF1C-204ENST00000544090 SYNJ1O43426 1573 aa24.9■■□□□ 1.58
TAF1C-204ENST00000544090 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
TAF1C-204ENST00000544090 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
TAF1C-204ENST00000544090 EEA1Q15075 1411 aa24.86■■□□□ 1.57
TAF1C-204ENST00000544090 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
TAF1C-204ENST00000544090 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
TAF1C-204ENST00000544090 MYT1Q01538 1121 aa24.76■■□□□ 1.55
TAF1C-204ENST00000544090 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
TAF1C-204ENST00000544090 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
TAF1C-204ENST00000544090 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.54
TAF1C-204ENST00000544090 RANGAP1P46060 587 aaPredicted RBP24.62■■□□□ 1.53
TAF1C-204ENST00000544090 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
TAF1C-204ENST00000544090 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
TAF1C-204ENST00000544090 CFTRP13569 1480 aa24.57■■□□□ 1.52
TAF1C-204ENST00000544090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
TAF1C-204ENST00000544090 KIF21BO75037 1637 aa24.51■■□□□ 1.51
TAF1C-204ENST00000544090 BIVM-ERCC5R4GMW8 1640 aa24.51■■□□□ 1.51
TAF1C-204ENST00000544090 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
TAF1C-204ENST00000544090 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
TAF1C-204ENST00000544090 CUX1P39880 1505 aa24.49■■□□□ 1.51
TAF1C-204ENST00000544090 CCER1Q8TC90 406 aaPredicted RBP24.46■■□□□ 1.51
TAF1C-204ENST00000544090 CLIP1P30622 1438 aa24.42■■□□□ 1.5
TAF1C-204ENST00000544090 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
TAF1C-204ENST00000544090 KIF27Q86VH2 1401 aa24.31■■□□□ 1.48
TAF1C-204ENST00000544090 APLP2Q06481 763 aa24.28■■□□□ 1.48
TAF1C-204ENST00000544090 PRXQ9BXM0 1461 aa24.27■■□□□ 1.48
TAF1C-204ENST00000544090 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
TAF1C-204ENST00000544090 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
TAF1C-204ENST00000544090 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
TAF1C-204ENST00000544090 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
TAF1C-204ENST00000544090 CUX2O14529 1486 aa24.18■■□□□ 1.46
TAF1C-204ENST00000544090 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
TAF1C-204ENST00000544090 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
TAF1C-204ENST00000544090 NESP48681 1621 aa24.13■■□□□ 1.45
TAF1C-204ENST00000544090 IGF1RP08069 1367 aa24.08■■□□□ 1.45
TAF1C-204ENST00000544090 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
TAF1C-204ENST00000544090 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
TAF1C-204ENST00000544090 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
TAF1C-204ENST00000544090 RAD54L2Q9Y4B4 1467 aa23.97■■□□□ 1.43
TAF1C-204ENST00000544090 KANK4Q5T7N3 995 aaPredicted RBP23.95■■□□□ 1.42
TAF1C-204ENST00000544090 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
TAF1C-204ENST00000544090 DNMBPQ6XZF7 1577 aa23.94■■□□□ 1.42
TAF1C-204ENST00000544090 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
TAF1C-204ENST00000544090 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
TAF1C-204ENST00000544090 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
TAF1C-204ENST00000544090 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.4
TAF1C-204ENST00000544090 URB2Q14146 1524 aaKnown RBP23.82■■□□□ 1.4
TAF1C-204ENST00000544090 P3H3Q8IVL6 736 aa23.8■■□□□ 1.4
TAF1C-204ENST00000544090 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
TAF1C-204ENST00000544090 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
TAF1C-204ENST00000544090 DIEXFQ68CQ4 756 aaKnown RBP23.75■■□□□ 1.39
TAF1C-204ENST00000544090 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
TAF1C-204ENST00000544090 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
TAF1C-204ENST00000544090 ITGAEP38570 1179 aa23.73■■□□□ 1.39
TAF1C-204ENST00000544090 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
TAF1C-204ENST00000544090 ZNF316A6NFI3 1004 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms