Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.45■■□□□ 1.98
FAM49AQ9H0Q0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
FAM49AQ9H0Q0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
FAM49AQ9H0Q0 DUX4L18-201ENST00000553347 1267 ntBASIC27.45■■□□□ 1.98
FAM49AQ9H0Q0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.45■■□□□ 1.98
FAM49AQ9H0Q0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.45■■□□□ 1.98
FAM49AQ9H0Q0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
FAM49AQ9H0Q0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
FAM49AQ9H0Q0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
FAM49AQ9H0Q0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
FAM49AQ9H0Q0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
FAM49AQ9H0Q0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
FAM49AQ9H0Q0 RP9P-202ENST00000450133 1212 ntBASIC27.43■■□□□ 1.98
FAM49AQ9H0Q0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
FAM49AQ9H0Q0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
FAM49AQ9H0Q0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.42■■□□□ 1.98
FAM49AQ9H0Q0 AC093536.1-201ENST00000569153 554 ntBASIC27.42■■□□□ 1.98
FAM49AQ9H0Q0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
FAM49AQ9H0Q0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
FAM49AQ9H0Q0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
FAM49AQ9H0Q0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
FAM49AQ9H0Q0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
FAM49AQ9H0Q0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
FAM49AQ9H0Q0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
FAM49AQ9H0Q0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.4■■□□□ 1.98
FAM49AQ9H0Q0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
FAM49AQ9H0Q0 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.4■■□□□ 1.98
FAM49AQ9H0Q0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
FAM49AQ9H0Q0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.39■■□□□ 1.98
FAM49AQ9H0Q0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.98
FAM49AQ9H0Q0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.39■■□□□ 1.98
FAM49AQ9H0Q0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.38■■□□□ 1.97
FAM49AQ9H0Q0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.38■■□□□ 1.97
FAM49AQ9H0Q0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
FAM49AQ9H0Q0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FAM49AQ9H0Q0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FAM49AQ9H0Q0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
FAM49AQ9H0Q0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.36■■□□□ 1.97
FAM49AQ9H0Q0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
FAM49AQ9H0Q0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
FAM49AQ9H0Q0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
FAM49AQ9H0Q0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
FAM49AQ9H0Q0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
FAM49AQ9H0Q0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.35■■□□□ 1.97
FAM49AQ9H0Q0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.35■■□□□ 1.97
FAM49AQ9H0Q0 MIR3960-201ENST00000583311 91 ntBASIC27.35■■□□□ 1.97
FAM49AQ9H0Q0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
FAM49AQ9H0Q0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.35■■□□□ 1.97
FAM49AQ9H0Q0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.35■■□□□ 1.97
FAM49AQ9H0Q0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
FAM49AQ9H0Q0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
FAM49AQ9H0Q0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.34■■□□□ 1.97
FAM49AQ9H0Q0 RAP2CP1-202ENST00000605179 643 ntBASIC27.34■■□□□ 1.97
FAM49AQ9H0Q0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
FAM49AQ9H0Q0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.34■■□□□ 1.97
FAM49AQ9H0Q0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
FAM49AQ9H0Q0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
FAM49AQ9H0Q0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.33■■□□□ 1.97
FAM49AQ9H0Q0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
FAM49AQ9H0Q0 AL359504.2-201ENST00000605506 1601 ntBASIC27.33■■□□□ 1.97
FAM49AQ9H0Q0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
FAM49AQ9H0Q0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.33■■□□□ 1.96
FAM49AQ9H0Q0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 WHAMMP3-201ENST00000611636 1609 ntBASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 DUX4L9-201ENST00000449051 1259 ntBASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 RARRES2P1-201ENST00000474487 481 ntBASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.32■■□□□ 1.96
FAM49AQ9H0Q0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FAM49AQ9H0Q0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.31■■□□□ 1.96
FAM49AQ9H0Q0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FAM49AQ9H0Q0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
FAM49AQ9H0Q0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM49AQ9H0Q0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM49AQ9H0Q0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.3■■□□□ 1.96
FAM49AQ9H0Q0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
FAM49AQ9H0Q0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
FAM49AQ9H0Q0 DRD5P2-201ENST00000421395 2012 ntBASIC27.29■■□□□ 1.96
FAM49AQ9H0Q0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
FAM49AQ9H0Q0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
FAM49AQ9H0Q0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
FAM49AQ9H0Q0 SPCS2P3-201ENST00000500401 656 ntBASIC27.28■■□□□ 1.96
FAM49AQ9H0Q0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.28■■□□□ 1.96
FAM49AQ9H0Q0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
FAM49AQ9H0Q0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.28■■□□□ 1.96
FAM49AQ9H0Q0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
FAM49AQ9H0Q0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.96
FAM49AQ9H0Q0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
FAM49AQ9H0Q0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
FAM49AQ9H0Q0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms