Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
SLC6A18Q96N87 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC6A18Q96N87 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.68■■□□□ 1.54
SLC6A18Q96N87 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.68■■□□□ 1.54
SLC6A18Q96N87 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.68■■□□□ 1.54
SLC6A18Q96N87 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC6A18Q96N87 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SLC6A18Q96N87 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.67■■□□□ 1.54
SLC6A18Q96N87 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SLC6A18Q96N87 RP9P-202ENST00000450133 1212 ntBASIC24.67■■□□□ 1.54
SLC6A18Q96N87 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.67■■□□□ 1.54
SLC6A18Q96N87 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.67■■□□□ 1.54
SLC6A18Q96N87 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.66■■□□□ 1.54
SLC6A18Q96N87 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SLC6A18Q96N87 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.66■■□□□ 1.54
SLC6A18Q96N87 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.66■■□□□ 1.54
SLC6A18Q96N87 AC093536.1-201ENST00000569153 554 ntBASIC24.65■■□□□ 1.54
SLC6A18Q96N87 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SLC6A18Q96N87 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SLC6A18Q96N87 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SLC6A18Q96N87 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.64■■□□□ 1.54
SLC6A18Q96N87 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SLC6A18Q96N87 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
SLC6A18Q96N87 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
SLC6A18Q96N87 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC6A18Q96N87 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A18Q96N87 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A18Q96N87 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A18Q96N87 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.62■■□□□ 1.53
SLC6A18Q96N87 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC6A18Q96N87 DUX4L9-201ENST00000449051 1259 ntBASIC24.61■■□□□ 1.53
SLC6A18Q96N87 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SLC6A18Q96N87 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.61■■□□□ 1.53
SLC6A18Q96N87 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC6A18Q96N87 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC6A18Q96N87 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.6■■□□□ 1.53
SLC6A18Q96N87 AC139426.1-201ENST00000568218 2529 ntBASIC24.6■■□□□ 1.53
SLC6A18Q96N87 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC6A18Q96N87 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC6A18Q96N87 RAP2CP1-202ENST00000605179 643 ntBASIC24.6■■□□□ 1.53
SLC6A18Q96N87 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC6A18Q96N87 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC6A18Q96N87 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC6A18Q96N87 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
SLC6A18Q96N87 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.59■■□□□ 1.53
SLC6A18Q96N87 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC6A18Q96N87 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC6A18Q96N87 MIR3960-201ENST00000583311 91 ntBASIC24.58■■□□□ 1.53
SLC6A18Q96N87 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SLC6A18Q96N87 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.57■■□□□ 1.52
SLC6A18Q96N87 SPCS2P3-201ENST00000500401 656 ntBASIC24.57■■□□□ 1.52
SLC6A18Q96N87 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SLC6A18Q96N87 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.57■■□□□ 1.52
SLC6A18Q96N87 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SLC6A18Q96N87 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SLC6A18Q96N87 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SLC6A18Q96N87 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.56■■□□□ 1.52
SLC6A18Q96N87 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC6A18Q96N87 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC6A18Q96N87 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SLC6A18Q96N87 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC6A18Q96N87 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC6A18Q96N87 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SLC6A18Q96N87 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC6A18Q96N87 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC6A18Q96N87 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC6A18Q96N87 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC6A18Q96N87 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SLC6A18Q96N87 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SLC6A18Q96N87 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.53■■□□□ 1.52
SLC6A18Q96N87 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
SLC6A18Q96N87 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.52■■□□□ 1.52
SLC6A18Q96N87 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.52■■□□□ 1.52
SLC6A18Q96N87 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SLC6A18Q96N87 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
SLC6A18Q96N87 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.51■■□□□ 1.51
SLC6A18Q96N87 BHLHE23-202ENST00000612929 1109 ntBASIC24.51■■□□□ 1.51
SLC6A18Q96N87 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
SLC6A18Q96N87 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SLC6A18Q96N87 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SLC6A18Q96N87 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SLC6A18Q96N87 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.5■■□□□ 1.51
SLC6A18Q96N87 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SLC6A18Q96N87 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.5■■□□□ 1.51
SLC6A18Q96N87 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.5■■□□□ 1.51
SLC6A18Q96N87 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
SLC6A18Q96N87 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC6A18Q96N87 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC6A18Q96N87 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SLC6A18Q96N87 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.49■■□□□ 1.51
SLC6A18Q96N87 AC010980.1-201ENST00000587192 1142 ntBASIC24.49■■□□□ 1.51
SLC6A18Q96N87 AL359504.2-201ENST00000605506 1601 ntBASIC24.49■■□□□ 1.51
SLC6A18Q96N87 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms