Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3L1Q8WWY6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MBD3L1Q8WWY6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 AC012676.1-201ENST00000574705 1949 ntBASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L1Q8WWY6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
MBD3L1Q8WWY6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3L1Q8WWY6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3L1Q8WWY6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L1Q8WWY6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L1Q8WWY6 AL139125.2-201ENST00000623134 1869 ntBASIC19.37■□□□□ 0.69
MBD3L1Q8WWY6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L1Q8WWY6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L1Q8WWY6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L1Q8WWY6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L1Q8WWY6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L1Q8WWY6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L1Q8WWY6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.36■□□□□ 0.69
MBD3L1Q8WWY6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
MBD3L1Q8WWY6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3L1Q8WWY6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3L1Q8WWY6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3L1Q8WWY6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.35■□□□□ 0.69
MBD3L1Q8WWY6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3L1Q8WWY6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 AC133561.1-201ENST00000568600 2415 ntBASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD3L1Q8WWY6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3L1Q8WWY6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3L1Q8WWY6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3L1Q8WWY6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3L1Q8WWY6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD3L1Q8WWY6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
MBD3L1Q8WWY6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L1Q8WWY6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD3L1Q8WWY6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L1Q8WWY6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L1Q8WWY6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MBD3L1Q8WWY6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L1Q8WWY6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L1Q8WWY6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
MBD3L1Q8WWY6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L1Q8WWY6 AC142472.1-201ENST00000612013 1741 ntBASIC19.3■□□□□ 0.68
MBD3L1Q8WWY6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.29■□□□□ 0.68
MBD3L1Q8WWY6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L1Q8WWY6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L1Q8WWY6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.29■□□□□ 0.68
MBD3L1Q8WWY6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.29■□□□□ 0.68
MBD3L1Q8WWY6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 AC138932.3-201ENST00000567634 1902 ntBASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MBD3L1Q8WWY6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 AC010501.1-201ENST00000606270 1962 ntBASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
MBD3L1Q8WWY6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MBD3L1Q8WWY6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
MBD3L1Q8WWY6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3L1Q8WWY6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms