RNA–Protein interactions for RNA: ENST00000584985.5

THRA-209, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-209ENST00000584985 NISCHQ9Y2I1 1504 aa45.99■■■■■ 4.95
THRA-209ENST00000584985 SHROOM4Q9ULL8 1493 aa39.66■■■■□ 3.94
THRA-209ENST00000584985 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
THRA-209ENST00000584985 SUPT5HO00267 1087 aaKnown RBP39.09■■■■□ 3.85
THRA-209ENST00000584985 ZCCHC6Q5VYS8 1495 aaKnown RBP38.95■■■■□ 3.83
THRA-209ENST00000584985 DCAF8L2P0C7V8 631 aa38.19■■■■□ 3.7
THRA-209ENST00000584985 CHIC1Q5VXU3 224 aa38.17■■■■□ 3.7
THRA-209ENST00000584985 MYO15BQ96JP2 1530 aa38.13■■■■□ 3.69
THRA-209ENST00000584985 ABCC9O60706 1549 aa37.88■■■■□ 3.65
THRA-209ENST00000584985 DCAF1Q9Y4B6 1507 aa37.86■■■■□ 3.65
THRA-209ENST00000584985 HRCP23327 699 aa37.68■■■■□ 3.62
THRA-209ENST00000584985 PCGF6Q9BYE7 350 aa37.45■■■■□ 3.58
THRA-209ENST00000584985 LOC105371045A0A1W2PR82 267 aa37.13■■■■□ 3.53
THRA-209ENST00000584985 PPARGC1BQ86YN6 1023 aaKnown RBP36.93■■■■□ 3.5
THRA-209ENST00000584985 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
THRA-209ENST00000584985 RSF1Q96T23 1441 aaPredicted RBP36.59■■■■□ 3.45
THRA-209ENST00000584985 NACADO15069 1562 aa36.58■■■■□ 3.45
THRA-209ENST00000584985 TRIM26Q12899 539 aaPredicted RBP36.57■■■■□ 3.45
THRA-209ENST00000584985 RB1CC1Q8TDY2 1594 aa36.51■■■■□ 3.44
THRA-209ENST00000584985 TRIM41Q8WV44 630 aa36.33■■■■□ 3.41
THRA-209ENST00000584985 FAM9AQ8IZU1 332 aaPredicted RBP36.13■■■■□ 3.37
THRA-209ENST00000584985 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
THRA-209ENST00000584985 CECR2Q9BXF3 1484 aa35.91■■■■□ 3.34
THRA-209ENST00000584985 ZEB1P37275 1124 aaPredicted RBP35.89■■■■□ 3.34
THRA-209ENST00000584985 EHMT2Q96KQ7 1210 aa35.87■■■■□ 3.33
THRA-209ENST00000584985 MROH2BQ7Z745 1585 aa35.8■■■■□ 3.32
THRA-209ENST00000584985 WIZO95785 1651 aa35.64■■■■□ 3.3
THRA-209ENST00000584985 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.28
THRA-209ENST00000584985 BICRAQ9NZM4 1560 aa35.52■■■■□ 3.28
THRA-209ENST00000584985 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
THRA-209ENST00000584985 EIF4G1Q04637 1599 aaKnown RBP35.26■■■■□ 3.24
THRA-209ENST00000584985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.11■■■■□ 3.21
THRA-209ENST00000584985 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
THRA-209ENST00000584985 SMARCA4P51532 1647 aa35.05■■■■□ 3.2
THRA-209ENST00000584985 ABCC8Q09428 1581 aa35.02■■■■□ 3.2
THRA-209ENST00000584985 SCAF1Q9H7N4 1312 aaKnown RBP35.02■■■■□ 3.2
THRA-209ENST00000584985 CCER1Q8TC90 406 aaPredicted RBP35■■■■□ 3.19
THRA-209ENST00000584985 CCDC88BA6NC98 1476 aa34.98■■■■□ 3.19
THRA-209ENST00000584985 SMARCA2P51531 1590 aa34.86■■■■□ 3.17
THRA-209ENST00000584985 WRNQ14191 1432 aaPredicted RBP eCLIP34.82■■■■□ 3.16
THRA-209ENST00000584985 TTBK1Q5TCY1 1321 aaPredicted RBP34.81■■■■□ 3.16
THRA-209ENST00000584985 SOGA1O94964 1423 aa34.8■■■■□ 3.16
THRA-209ENST00000584985 CEP162Q5TB80 1403 aa34.79■■■■□ 3.16
THRA-209ENST00000584985 TNIKQ9UKE5 1360 aa34.68■■■■□ 3.14
THRA-209ENST00000584985 PELP1Q8IZL8 1130 aaKnown RBP34.63■■■■□ 3.13
THRA-209ENST00000584985 CSRNP3Q8WYN3 585 aa34.63■■■■□ 3.13
THRA-209ENST00000584985 RUSC2Q8N2Y8 1516 aa34.62■■■■□ 3.13
THRA-209ENST00000584985 UBTFP17480 764 aaKnown RBP34.56■■■■□ 3.12
THRA-209ENST00000584985 EEA1Q15075 1411 aa34.55■■■■□ 3.12
THRA-209ENST00000584985 DIEXFQ68CQ4 756 aaKnown RBP34.54■■■■□ 3.12
THRA-209ENST00000584985 ACIN1Q9UKV3 1341 aaKnown RBP34.52■■■■□ 3.12
THRA-209ENST00000584985 NEUROD1Q13562 356 aa34.47■■■■□ 3.11
THRA-209ENST00000584985 PEG3Q9GZU2 1588 aa34.43■■■■□ 3.1
THRA-209ENST00000584985 GOLGA3Q08378 1498 aa34.39■■■■□ 3.1
THRA-209ENST00000584985 DNAJC5BQ9UF47 199 aa34.31■■■■□ 3.08
THRA-209ENST00000584985 CC2D2AQ9P2K1 1620 aa34.25■■■■□ 3.07
THRA-209ENST00000584985 CENPBP07199 599 aaPredicted RBP34.21■■■■□ 3.07
THRA-209ENST00000584985 GTF3C3Q9Y5Q9 886 aa34.16■■■■□ 3.06
THRA-209ENST00000584985 ZNF316A6NFI3 1004 aaPredicted RBP34.16■■■■□ 3.06
THRA-209ENST00000584985 SYNJ1O43426 1573 aa34.16■■■■□ 3.06
THRA-209ENST00000584985 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
THRA-209ENST00000584985 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
THRA-209ENST00000584985 HNRNPUL2Q1KMD3 747 aaKnown RBP34.08■■■■□ 3.05
THRA-209ENST00000584985 KIF21BO75037 1637 aa34.07■■■■□ 3.04
THRA-209ENST00000584985 CLIP1P30622 1438 aa34.05■■■■□ 3.04
THRA-209ENST00000584985 BAZ1BQ9UIG0 1483 aaKnown RBP34.01■■■■□ 3.04
THRA-209ENST00000584985 VPS8Q8N3P4 1428 aa33.94■■■■□ 3.02
THRA-209ENST00000584985 RAPGEF2Q9Y4G8 1499 aa33.9■■■■□ 3.02
THRA-209ENST00000584985 RANGAP1P46060 587 aaPredicted RBP33.85■■■■□ 3.01
THRA-209ENST00000584985 APLP2Q06481 763 aa33.84■■■■□ 3.01
THRA-209ENST00000584985 YTHDC1Q96MU7 727 aaKnown RBP33.8■■■■□ 3
THRA-209ENST00000584985 MIER1Q8N108 512 aa33.78■■■■□ 3
THRA-209ENST00000584985 NCAPD3P42695 1498 aa33.76■■■□□ 2.99
THRA-209ENST00000584985 TOP2BQ02880 1626 aa33.66■■■□□ 2.98
THRA-209ENST00000584985 HMGXB3Q12766 1538 aa33.64■■■□□ 2.98
THRA-209ENST00000584985 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.96
THRA-209ENST00000584985 PRXQ9BXM0 1461 aa33.47■■■□□ 2.95
THRA-209ENST00000584985 ERICH3Q5RHP9 1530 aa33.45■■■□□ 2.95
THRA-209ENST00000584985 ARAP1Q96P48 1450 aa33.45■■■□□ 2.95
THRA-209ENST00000584985 KANK4Q5T7N3 995 aaPredicted RBP33.42■■■□□ 2.94
THRA-209ENST00000584985 DHX57Q6P158 1386 aaKnown RBP33.41■■■□□ 2.94
THRA-209ENST00000584985 CLSPNQ9HAW4 1339 aa33.37■■■□□ 2.93
THRA-209ENST00000584985 CUX1P39880 1505 aa33.29■■■□□ 2.92
THRA-209ENST00000584985 KIF27Q86VH2 1401 aa33.22■■■□□ 2.91
THRA-209ENST00000584985 RRBP1Q9P2E9 1410 aaKnown RBP33.2■■■□□ 2.91
THRA-209ENST00000584985 CFTRP13569 1480 aa33.18■■■□□ 2.9
THRA-209ENST00000584985 ARHGAP35Q9NRY4 1499 aa33.1■■■□□ 2.89
THRA-209ENST00000584985 CCNB3Q8WWL7 1395 aa33.07■■■□□ 2.88
THRA-209ENST00000584985 PRDM2Q13029 1718 aa33.06■■■□□ 2.88
THRA-209ENST00000584985 CUX2O14529 1486 aa33.05■■■□□ 2.88
THRA-209ENST00000584985 ITGAEP38570 1179 aa33.03■■■□□ 2.88
THRA-209ENST00000584985 NESP48681 1621 aa33■■■□□ 2.87
THRA-209ENST00000584985 MYT1Q01538 1121 aa32.91■■■□□ 2.86
THRA-209ENST00000584985 IGF1RP08069 1367 aa32.87■■■□□ 2.85
THRA-209ENST00000584985 RAB3GAP2Q9H2M9 1393 aa32.85■■■□□ 2.85
THRA-209ENST00000584985 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
THRA-209ENST00000584985 SUPT16HQ9Y5B9 1047 aaKnown RBP32.8■■■□□ 2.84
THRA-209ENST00000584985 LAMC3Q9Y6N6 1575 aa32.79■■■□□ 2.84
THRA-209ENST00000584985 TIAM1Q13009 1591 aa32.78■■■□□ 2.84
THRA-209ENST00000584985 MAPKBP1O60336 1514 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms