RNA–Protein interactions for RNA: ENST00000615252.4

GNB1-210, Transcript of G protein subunit beta 1, humanhuman

TSL 5 BASIC

Gene GNB1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-210ENST00000615252 NISCHQ9Y2I1 1504 aa42.02■■■■■ 4.32
GNB1-210ENST00000615252 HRCP23327 699 aa38.24■■■■□ 3.71
GNB1-210ENST00000615252 SHROOM4Q9ULL8 1493 aa38.1■■■■□ 3.69
GNB1-210ENST00000615252 SUPT5HO00267 1087 aaKnown RBP38.02■■■■□ 3.68
GNB1-210ENST00000615252 PPARGC1BQ86YN6 1023 aaKnown RBP37.84■■■■□ 3.65
GNB1-210ENST00000615252 PCGF6Q9BYE7 350 aa37.77■■■■□ 3.64
GNB1-210ENST00000615252 MYO15BQ96JP2 1530 aa37.23■■■■□ 3.55
GNB1-210ENST00000615252 CHIC1Q5VXU3 224 aa37.07■■■■□ 3.52
GNB1-210ENST00000615252 PELP1Q8IZL8 1130 aaKnown RBP36.72■■■■□ 3.47
GNB1-210ENST00000615252 LOC105371045A0A1W2PR82 267 aa36.52■■■■□ 3.44
GNB1-210ENST00000615252 SCAF1Q9H7N4 1312 aaKnown RBP36.34■■■■□ 3.41
GNB1-210ENST00000615252 TRIM26Q12899 539 aaPredicted RBP36.22■■■■□ 3.39
GNB1-210ENST00000615252 DCAF1Q9Y4B6 1507 aa36.14■■■■□ 3.38
GNB1-210ENST00000615252 DCAF8L2P0C7V8 631 aa36.03■■■■□ 3.36
GNB1-210ENST00000615252 ZEB1P37275 1124 aaPredicted RBP35.8■■■■□ 3.32
GNB1-210ENST00000615252 ZCCHC6Q5VYS8 1495 aaKnown RBP35.68■■■■□ 3.3
GNB1-210ENST00000615252 CCDC180Q9P1Z9 1646 aa35.63■■■■□ 3.29
GNB1-210ENST00000615252 EHMT2Q96KQ7 1210 aa35.43■■■■□ 3.26
GNB1-210ENST00000615252 NEUROD1Q13562 356 aa35.38■■■■□ 3.25
GNB1-210ENST00000615252 ACIN1Q9UKV3 1341 aaKnown RBP35.35■■■■□ 3.25
GNB1-210ENST00000615252 FAM9AQ8IZU1 332 aaPredicted RBP35.3■■■■□ 3.24
GNB1-210ENST00000615252 GTF3C3Q9Y5Q9 886 aa35.24■■■■□ 3.23
GNB1-210ENST00000615252 MYT1Q01538 1121 aa35.18■■■■□ 3.22
GNB1-210ENST00000615252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35■■■■□ 3.19
GNB1-210ENST00000615252 TRIM41Q8WV44 630 aa34.95■■■■□ 3.18
GNB1-210ENST00000615252 CENPBP07199 599 aaPredicted RBP34.92■■■■□ 3.18
GNB1-210ENST00000615252 CCER1Q8TC90 406 aaPredicted RBP34.89■■■■□ 3.18
GNB1-210ENST00000615252 DIEXFQ68CQ4 756 aaKnown RBP34.83■■■■□ 3.17
GNB1-210ENST00000615252 YTHDC1Q96MU7 727 aaKnown RBP34.62■■■■□ 3.13
GNB1-210ENST00000615252 TTBK1Q5TCY1 1321 aaPredicted RBP34.54■■■■□ 3.12
GNB1-210ENST00000615252 ABCC9O60706 1549 aa34.07■■■■□ 3.05
GNB1-210ENST00000615252 ZNF316A6NFI3 1004 aaPredicted RBP34.04■■■■□ 3.04
GNB1-210ENST00000615252 RSF1Q96T23 1441 aaPredicted RBP34.04■■■■□ 3.04
GNB1-210ENST00000615252 MIER1Q8N108 512 aa33.98■■■■□ 3.03
GNB1-210ENST00000615252 RB1CC1Q8TDY2 1594 aa33.9■■■■□ 3.02
GNB1-210ENST00000615252 SCRIBQ14160 1630 aa33.69■■■□□ 2.98
GNB1-210ENST00000615252 HNRNPUL2Q1KMD3 747 aaKnown RBP33.5■■■□□ 2.95
GNB1-210ENST00000615252 SUPT16HQ9Y5B9 1047 aaKnown RBP33.4■■■□□ 2.94
GNB1-210ENST00000615252 BCL11AQ9H165 835 aa33.36■■■□□ 2.93
GNB1-210ENST00000615252 ANP32EQ9BTT0 268 aa33.31■■■□□ 2.92
GNB1-210ENST00000615252 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
GNB1-210ENST00000615252 CEP162Q5TB80 1403 aa33.27■■■□□ 2.92
GNB1-210ENST00000615252 TSHZ2Q9NRE2 1034 aa33.26■■■□□ 2.92
GNB1-210ENST00000615252 WRNQ14191 1432 aaPredicted RBP eCLIP33.16■■■□□ 2.94e-6■□□□□ 10.4
GNB1-210ENST00000615252 CECR2Q9BXF3 1484 aa33.16■■■□□ 2.9
GNB1-210ENST00000615252 CSRNP3Q8WYN3 585 aa33.11■■■□□ 2.89
GNB1-210ENST00000615252 BCANQ96GW7 911 aa33.07■■■□□ 2.89
GNB1-210ENST00000615252 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
GNB1-210ENST00000615252 CCDC88BA6NC98 1476 aa32.95■■■□□ 2.87
GNB1-210ENST00000615252 SOGA1O94964 1423 aa32.93■■■□□ 2.86
GNB1-210ENST00000615252 TNIKQ9UKE5 1360 aa32.9■■■□□ 2.86
GNB1-210ENST00000615252 CLSPNQ9HAW4 1339 aa32.89■■■□□ 2.86
GNB1-210ENST00000615252 ABCC8Q09428 1581 aa32.89■■■□□ 2.85
GNB1-210ENST00000615252 RANGAP1P46060 587 aaPredicted RBP32.87■■■□□ 2.85
GNB1-210ENST00000615252 NACADO15069 1562 aa32.87■■■□□ 2.85
GNB1-210ENST00000615252 WIZO95785 1651 aa32.87■■■□□ 2.85
GNB1-210ENST00000615252 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.849e-8■■□□□ 11.5
GNB1-210ENST00000615252 KCNH8Q96L42 1107 aa32.76■■■□□ 2.84
GNB1-210ENST00000615252 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
GNB1-210ENST00000615252 APLP2Q06481 763 aa32.71■■■□□ 2.83
GNB1-210ENST00000615252 FKBP8Q14318 412 aa32.67■■■□□ 2.82
GNB1-210ENST00000615252 ITGAEP38570 1179 aa32.52■■■□□ 2.8
GNB1-210ENST00000615252 RBM19Q9Y4C8 960 aaKnown RBP32.52■■■□□ 2.8
GNB1-210ENST00000615252 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
GNB1-210ENST00000615252 GOLGA3Q08378 1498 aa32.46■■■□□ 2.79
GNB1-210ENST00000615252 DHX57Q6P158 1386 aaKnown RBP32.39■■■□□ 2.78
GNB1-210ENST00000615252 CLIP1P30622 1438 aa32.39■■■□□ 2.78
GNB1-210ENST00000615252 BAZ1AQ9NRL2 1556 aaPredicted RBP32.38■■■□□ 2.77
GNB1-210ENST00000615252 NEFLP07196 543 aa32.34■■■□□ 2.77
GNB1-210ENST00000615252 EEA1Q15075 1411 aa32.31■■■□□ 2.76
GNB1-210ENST00000615252 TRIM52Q96A61 297 aa32.25■■■□□ 2.75
GNB1-210ENST00000615252 DDX10Q13206 875 aaKnown RBP32.24■■■□□ 2.75
GNB1-210ENST00000615252 VPS8Q8N3P4 1428 aa32.22■■■□□ 2.75
GNB1-210ENST00000615252 MSH5O43196 834 aa32.22■■■□□ 2.75
GNB1-210ENST00000615252 ERICH6Q7L0X2 663 aa32.13■■■□□ 2.73
GNB1-210ENST00000615252 CEP164Q9UPV0 1460 aa32.08■■■□□ 2.73
GNB1-210ENST00000615252 HIRIP3Q9BW71 556 aaPredicted RBP32.08■■■□□ 2.73
GNB1-210ENST00000615252 UNC13AQ9UPW8 1703 aa32.07■■■□□ 2.72
GNB1-210ENST00000615252 KANK4Q5T7N3 995 aaPredicted RBP32.06■■■□□ 2.72
GNB1-210ENST00000615252 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
GNB1-210ENST00000615252 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
GNB1-210ENST00000615252 IRX6P78412 446 aaPredicted RBP31.99■■■□□ 2.71
GNB1-210ENST00000615252 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
GNB1-210ENST00000615252 PRKCSHP14314 528 aaPredicted RBP31.86■■■□□ 2.69
GNB1-210ENST00000615252 KIF21BO75037 1637 aa31.86■■■□□ 2.69
GNB1-210ENST00000615252 SIN3AQ96ST3 1273 aa31.83■■■□□ 2.69
GNB1-210ENST00000615252 CDK11AQ9UQ88 783 aaPredicted RBP31.81■■■□□ 2.68
GNB1-210ENST00000615252 SMARCA4P51532 1647 aa31.81■■■□□ 2.68
GNB1-210ENST00000615252 ANP32CO43423 234 aa31.78■■■□□ 2.68
GNB1-210ENST00000615252 BICRAQ9NZM4 1560 aa31.78■■■□□ 2.68
GNB1-210ENST00000615252 DEKP35659 375 aaKnown RBP31.71■■■□□ 2.67
GNB1-210ENST00000615252 PPP1R15AO75807 674 aaPredicted RBP31.7■■■□□ 2.67
GNB1-210ENST00000615252 FANCIQ9NVI1 1328 aa31.7■■■□□ 2.66
GNB1-210ENST00000615252 RAB3GAP2Q9H2M9 1393 aa31.66■■■□□ 2.66
GNB1-210ENST00000615252 SYNJ1O43426 1573 aa31.65■■■□□ 2.66
GNB1-210ENST00000615252 CCNB3Q8WWL7 1395 aa31.64■■■□□ 2.66
GNB1-210ENST00000615252 HNRNPUQ00839 825 aaKnown RBP eCLIP31.62■■■□□ 2.65
GNB1-210ENST00000615252 BAZ1BQ9UIG0 1483 aaKnown RBP31.61■■■□□ 2.65
GNB1-210ENST00000615252 NBR1Q14596 966 aa31.6■■■□□ 2.65
GNB1-210ENST00000615252 CCER2I3L3R5 266 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms