Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
TMEM40Q8WWA1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMEM40Q8WWA1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TMEM40Q8WWA1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
TMEM40Q8WWA1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMEM40Q8WWA1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.26■■□□□ 1.95
TMEM40Q8WWA1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMEM40Q8WWA1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.26■■□□□ 1.95
TMEM40Q8WWA1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.26■■□□□ 1.95
TMEM40Q8WWA1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TMEM40Q8WWA1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TMEM40Q8WWA1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TMEM40Q8WWA1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
TMEM40Q8WWA1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TMEM40Q8WWA1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.25■■□□□ 1.95
TMEM40Q8WWA1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
TMEM40Q8WWA1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 RP9P-202ENST00000450133 1212 ntBASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
TMEM40Q8WWA1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TMEM40Q8WWA1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TMEM40Q8WWA1 AC093536.1-201ENST00000569153 554 ntBASIC27.23■■□□□ 1.95
TMEM40Q8WWA1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.23■■□□□ 1.95
TMEM40Q8WWA1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.22■■□□□ 1.95
TMEM40Q8WWA1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TMEM40Q8WWA1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TMEM40Q8WWA1 DUX4L18-201ENST00000553347 1267 ntBASIC27.22■■□□□ 1.95
TMEM40Q8WWA1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.22■■□□□ 1.95
TMEM40Q8WWA1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TMEM40Q8WWA1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.21■■□□□ 1.95
TMEM40Q8WWA1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TMEM40Q8WWA1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.2■■□□□ 1.94
TMEM40Q8WWA1 RAP2CP1-202ENST00000605179 643 ntBASIC27.2■■□□□ 1.94
TMEM40Q8WWA1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.2■■□□□ 1.94
TMEM40Q8WWA1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.19■■□□□ 1.94
TMEM40Q8WWA1 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.19■■□□□ 1.94
TMEM40Q8WWA1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TMEM40Q8WWA1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
TMEM40Q8WWA1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.18■■□□□ 1.94
TMEM40Q8WWA1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM40Q8WWA1 DRD5P2-201ENST00000421395 2012 ntBASIC27.17■■□□□ 1.94
TMEM40Q8WWA1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TMEM40Q8WWA1 AL359504.2-201ENST00000605506 1601 ntBASIC27.16■■□□□ 1.94
TMEM40Q8WWA1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.16■■□□□ 1.94
TMEM40Q8WWA1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.16■■□□□ 1.94
TMEM40Q8WWA1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.15■■□□□ 1.94
TMEM40Q8WWA1 SPCS2P3-201ENST00000500401 656 ntBASIC27.15■■□□□ 1.94
TMEM40Q8WWA1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM40Q8WWA1 WHAMMP3-201ENST00000611636 1609 ntBASIC27.15■■□□□ 1.94
TMEM40Q8WWA1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TMEM40Q8WWA1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 DUX4L9-201ENST00000449051 1259 ntBASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 MIR3960-201ENST00000583311 91 ntBASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
TMEM40Q8WWA1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TMEM40Q8WWA1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TMEM40Q8WWA1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TMEM40Q8WWA1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TMEM40Q8WWA1 RARRES2P1-201ENST00000474487 481 ntBASIC27.12■■□□□ 1.93
TMEM40Q8WWA1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
TMEM40Q8WWA1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM40Q8WWA1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM40Q8WWA1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.11■■□□□ 1.93
TMEM40Q8WWA1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
TMEM40Q8WWA1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.11■■□□□ 1.93
TMEM40Q8WWA1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TMEM40Q8WWA1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TMEM40Q8WWA1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.1■■□□□ 1.93
TMEM40Q8WWA1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.1■■□□□ 1.93
TMEM40Q8WWA1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.1■■□□□ 1.93
TMEM40Q8WWA1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TMEM40Q8WWA1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
TMEM40Q8WWA1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
TMEM40Q8WWA1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM40Q8WWA1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
TMEM40Q8WWA1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
TMEM40Q8WWA1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
TMEM40Q8WWA1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TMEM40Q8WWA1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TMEM40Q8WWA1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TMEM40Q8WWA1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.07■■□□□ 1.92
TMEM40Q8WWA1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms