Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAB42Q8N4Z0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAB42Q8N4Z0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAB42Q8N4Z0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RAB42Q8N4Z0 AC022413.1-201ENST00000624602 984 ntBASIC24.06■■□□□ 1.44
RAB42Q8N4Z0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAB42Q8N4Z0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RAB42Q8N4Z0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAB42Q8N4Z0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAB42Q8N4Z0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
RAB42Q8N4Z0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.04■■□□□ 1.44
RAB42Q8N4Z0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
RAB42Q8N4Z0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RAB42Q8N4Z0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RAB42Q8N4Z0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
RAB42Q8N4Z0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RAB42Q8N4Z0 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.03■■□□□ 1.44
RAB42Q8N4Z0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RAB42Q8N4Z0 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.03■■□□□ 1.44
RAB42Q8N4Z0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RAB42Q8N4Z0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
RAB42Q8N4Z0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.02■■□□□ 1.44
RAB42Q8N4Z0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
RAB42Q8N4Z0 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.02■■□□□ 1.44
RAB42Q8N4Z0 AC060814.1-201ENST00000554326 538 ntBASIC24.02■■□□□ 1.44
RAB42Q8N4Z0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAB42Q8N4Z0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RAB42Q8N4Z0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.01■■□□□ 1.43
RAB42Q8N4Z0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAB42Q8N4Z0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RAB42Q8N4Z0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24■■□□□ 1.43
RAB42Q8N4Z0 GPX1-201ENST00000419349 1106 ntBASIC24■■□□□ 1.43
RAB42Q8N4Z0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RAB42Q8N4Z0 AL449106.1-201ENST00000608517 1980 ntBASIC24■■□□□ 1.43
RAB42Q8N4Z0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RAB42Q8N4Z0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RAB42Q8N4Z0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAB42Q8N4Z0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAB42Q8N4Z0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAB42Q8N4Z0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.99■■□□□ 1.43
RAB42Q8N4Z0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAB42Q8N4Z0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
RAB42Q8N4Z0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAB42Q8N4Z0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAB42Q8N4Z0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.98■■□□□ 1.43
RAB42Q8N4Z0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAB42Q8N4Z0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RAB42Q8N4Z0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RAB42Q8N4Z0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RAB42Q8N4Z0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RAB42Q8N4Z0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.97■■□□□ 1.43
RAB42Q8N4Z0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAB42Q8N4Z0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAB42Q8N4Z0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RAB42Q8N4Z0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAB42Q8N4Z0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAB42Q8N4Z0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.96■■□□□ 1.43
RAB42Q8N4Z0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RAB42Q8N4Z0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RAB42Q8N4Z0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
RAB42Q8N4Z0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.95■■□□□ 1.42
RAB42Q8N4Z0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RAB42Q8N4Z0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAB42Q8N4Z0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RAB42Q8N4Z0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAB42Q8N4Z0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RAB42Q8N4Z0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RAB42Q8N4Z0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAB42Q8N4Z0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RAB42Q8N4Z0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.93■■□□□ 1.42
RAB42Q8N4Z0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.92■■□□□ 1.42
RAB42Q8N4Z0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAB42Q8N4Z0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAB42Q8N4Z0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAB42Q8N4Z0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAB42Q8N4Z0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAB42Q8N4Z0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.91■■□□□ 1.42
RAB42Q8N4Z0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RAB42Q8N4Z0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAB42Q8N4Z0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAB42Q8N4Z0 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.9■■□□□ 1.42
RAB42Q8N4Z0 AC092296.2-201ENST00000589470 999 ntBASIC23.9■■□□□ 1.42
RAB42Q8N4Z0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAB42Q8N4Z0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RAB42Q8N4Z0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RAB42Q8N4Z0 ECEL1P2-201ENST00000461596 1295 ntBASIC23.89■■□□□ 1.41
RAB42Q8N4Z0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.89■■□□□ 1.41
RAB42Q8N4Z0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RAB42Q8N4Z0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RAB42Q8N4Z0 HSD17B1P1-201ENST00000590052 955 ntBASIC23.89■■□□□ 1.41
RAB42Q8N4Z0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RAB42Q8N4Z0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.88■■□□□ 1.41
RAB42Q8N4Z0 AC142472.1-201ENST00000612013 1741 ntBASIC23.88■■□□□ 1.41
RAB42Q8N4Z0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RAB42Q8N4Z0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.88■■□□□ 1.41
RAB42Q8N4Z0 AP004609.3-201ENST00000610705 1884 ntBASIC23.87■■□□□ 1.41
RAB42Q8N4Z0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAB42Q8N4Z0 RNF126P1-201ENST00000567452 1320 ntBASIC23.86■■□□□ 1.41
RAB42Q8N4Z0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAB42Q8N4Z0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 744.5 ms