Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.72■■□□□ 1.07
RTTNQ86VV8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTTNQ86VV8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.71■■□□□ 1.07
RTTNQ86VV8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RTTNQ86VV8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RTTNQ86VV8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.71■■□□□ 1.07
RTTNQ86VV8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTTNQ86VV8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTTNQ86VV8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
RTTNQ86VV8 AL449106.1-201ENST00000608517 1980 ntBASIC21.7■■□□□ 1.07
RTTNQ86VV8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RTTNQ86VV8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.7■■□□□ 1.06
RTTNQ86VV8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
RTTNQ86VV8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.7■■□□□ 1.06
RTTNQ86VV8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTTNQ86VV8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RTTNQ86VV8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RTTNQ86VV8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTTNQ86VV8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
RTTNQ86VV8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.69■■□□□ 1.06
RTTNQ86VV8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.69■■□□□ 1.06
RTTNQ86VV8 WHAMMP3-201ENST00000611636 1609 ntBASIC21.68■■□□□ 1.06
RTTNQ86VV8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTTNQ86VV8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTTNQ86VV8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.67■■□□□ 1.06
RTTNQ86VV8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.67■■□□□ 1.06
RTTNQ86VV8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTTNQ86VV8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTTNQ86VV8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTTNQ86VV8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RTTNQ86VV8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTTNQ86VV8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTTNQ86VV8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTTNQ86VV8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTTNQ86VV8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RTTNQ86VV8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTTNQ86VV8 AC008813.1-201ENST00000536597 885 ntBASIC21.65■■□□□ 1.06
RTTNQ86VV8 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.65■■□□□ 1.06
RTTNQ86VV8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTTNQ86VV8 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.65■■□□□ 1.06
RTTNQ86VV8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.65■■□□□ 1.06
RTTNQ86VV8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTTNQ86VV8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RTTNQ86VV8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTTNQ86VV8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RTTNQ86VV8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTTNQ86VV8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.64■■□□□ 1.06
RTTNQ86VV8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTTNQ86VV8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTTNQ86VV8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTTNQ86VV8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTTNQ86VV8 AC012354.3-201ENST00000623734 483 ntBASIC21.64■■□□□ 1.05
RTTNQ86VV8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTTNQ86VV8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
RTTNQ86VV8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.63■■□□□ 1.05
RTTNQ86VV8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RTTNQ86VV8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.63■■□□□ 1.05
RTTNQ86VV8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTTNQ86VV8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTTNQ86VV8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTTNQ86VV8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTTNQ86VV8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTTNQ86VV8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.62■■□□□ 1.05
RTTNQ86VV8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.62■■□□□ 1.05
RTTNQ86VV8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTTNQ86VV8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.62■■□□□ 1.05
RTTNQ86VV8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTTNQ86VV8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTTNQ86VV8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RTTNQ86VV8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.61■■□□□ 1.05
RTTNQ86VV8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTTNQ86VV8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTTNQ86VV8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTTNQ86VV8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTTNQ86VV8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.6■■□□□ 1.05
RTTNQ86VV8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTTNQ86VV8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTTNQ86VV8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTTNQ86VV8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTTNQ86VV8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RTTNQ86VV8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RTTNQ86VV8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTTNQ86VV8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.59■■□□□ 1.05
RTTNQ86VV8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTTNQ86VV8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTTNQ86VV8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTTNQ86VV8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTTNQ86VV8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTTNQ86VV8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTTNQ86VV8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RTTNQ86VV8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.57■■□□□ 1.04
RTTNQ86VV8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.57■■□□□ 1.04
RTTNQ86VV8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.57■■□□□ 1.04
RTTNQ86VV8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.57■■□□□ 1.04
RTTNQ86VV8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTTNQ86VV8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTTNQ86VV8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RTTNQ86VV8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTTNQ86VV8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTTNQ86VV8 NTF6A-201ENST00000591175 560 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms