Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TSPY13P-201ENST00000338964 914 ntBASIC26.44■■□□□ 1.82
VARS2Q5ST30 ATP5G2P3-201ENST00000429083 425 ntBASIC26.44■■□□□ 1.82
VARS2Q5ST30 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.44■■□□□ 1.82
VARS2Q5ST30 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
VARS2Q5ST30 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VARS2Q5ST30 AL592293.1-201ENST00000502889 1188 ntBASIC26.43■■□□□ 1.82
VARS2Q5ST30 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.43■■□□□ 1.82
VARS2Q5ST30 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VARS2Q5ST30 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
VARS2Q5ST30 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.43■■□□□ 1.82
VARS2Q5ST30 AC026202.3-201ENST00000600805 1127 ntBASIC26.42■■□□□ 1.82
VARS2Q5ST30 DRD5P2-201ENST00000421395 2012 ntBASIC26.42■■□□□ 1.82
VARS2Q5ST30 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VARS2Q5ST30 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.41■■□□□ 1.82
VARS2Q5ST30 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VARS2Q5ST30 RP9P-202ENST00000450133 1212 ntBASIC26.41■■□□□ 1.82
VARS2Q5ST30 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
VARS2Q5ST30 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.41■■□□□ 1.82
VARS2Q5ST30 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
VARS2Q5ST30 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VARS2Q5ST30 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VARS2Q5ST30 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
VARS2Q5ST30 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
VARS2Q5ST30 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
VARS2Q5ST30 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
VARS2Q5ST30 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
VARS2Q5ST30 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VARS2Q5ST30 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VARS2Q5ST30 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VARS2Q5ST30 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VARS2Q5ST30 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VARS2Q5ST30 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
VARS2Q5ST30 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VARS2Q5ST30 AC129492.7-201ENST00000622992 756 ntBASIC26.39■■□□□ 1.82
VARS2Q5ST30 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
VARS2Q5ST30 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
VARS2Q5ST30 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
VARS2Q5ST30 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.38■■□□□ 1.81
VARS2Q5ST30 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.38■■□□□ 1.81
VARS2Q5ST30 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
VARS2Q5ST30 AC093536.1-201ENST00000569153 554 ntBASIC26.38■■□□□ 1.81
VARS2Q5ST30 WHAMMP3-201ENST00000611636 1609 ntBASIC26.38■■□□□ 1.81
VARS2Q5ST30 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.37■■□□□ 1.81
VARS2Q5ST30 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
VARS2Q5ST30 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VARS2Q5ST30 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
VARS2Q5ST30 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.36■■□□□ 1.81
VARS2Q5ST30 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VARS2Q5ST30 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
VARS2Q5ST30 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VARS2Q5ST30 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.35■■□□□ 1.81
VARS2Q5ST30 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.35■■□□□ 1.81
VARS2Q5ST30 MIR3960-201ENST00000583311 91 ntBASIC26.35■■□□□ 1.81
VARS2Q5ST30 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.35■■□□□ 1.81
VARS2Q5ST30 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
VARS2Q5ST30 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VARS2Q5ST30 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.34■■□□□ 1.81
VARS2Q5ST30 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VARS2Q5ST30 AL359504.2-201ENST00000605506 1601 ntBASIC26.34■■□□□ 1.81
VARS2Q5ST30 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VARS2Q5ST30 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
VARS2Q5ST30 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
VARS2Q5ST30 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
VARS2Q5ST30 RAP2CP1-202ENST00000605179 643 ntBASIC26.33■■□□□ 1.81
VARS2Q5ST30 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
VARS2Q5ST30 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VARS2Q5ST30 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
VARS2Q5ST30 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VARS2Q5ST30 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
VARS2Q5ST30 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VARS2Q5ST30 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.31■■□□□ 1.8
VARS2Q5ST30 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.31■■□□□ 1.8
VARS2Q5ST30 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.3■■□□□ 1.8
VARS2Q5ST30 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VARS2Q5ST30 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VARS2Q5ST30 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.3■■□□□ 1.8
VARS2Q5ST30 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VARS2Q5ST30 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VARS2Q5ST30 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
VARS2Q5ST30 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VARS2Q5ST30 DUX4L18-201ENST00000553347 1267 ntBASIC26.29■■□□□ 1.8
VARS2Q5ST30 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VARS2Q5ST30 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
VARS2Q5ST30 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VARS2Q5ST30 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.27■■□□□ 1.8
VARS2Q5ST30 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.27■■□□□ 1.8
VARS2Q5ST30 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VARS2Q5ST30 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.27■■□□□ 1.8
VARS2Q5ST30 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
VARS2Q5ST30 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
VARS2Q5ST30 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
VARS2Q5ST30 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
VARS2Q5ST30 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
VARS2Q5ST30 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.26■■□□□ 1.79
VARS2Q5ST30 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
VARS2Q5ST30 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
VARS2Q5ST30 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
VARS2Q5ST30 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
VARS2Q5ST30 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.25■■□□□ 1.79
VARS2Q5ST30 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms