Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNFSF11O14788 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.29■■□□□ 1.16
TNFSF11O14788 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TNFSF11O14788 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.29■■□□□ 1.16
TNFSF11O14788 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFSF11O14788 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TNFSF11O14788 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFSF11O14788 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFSF11O14788 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.27■■□□□ 1.16
TNFSF11O14788 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.26■■□□□ 1.15
TNFSF11O14788 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF11O14788 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF11O14788 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF11O14788 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF11O14788 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
TNFSF11O14788 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF11O14788 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF11O14788 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
TNFSF11O14788 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFSF11O14788 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TNFSF11O14788 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TNFSF11O14788 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFSF11O14788 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.25■■□□□ 1.15
TNFSF11O14788 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFSF11O14788 AL449106.1-201ENST00000608517 1980 ntBASIC22.25■■□□□ 1.15
TNFSF11O14788 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNFSF11O14788 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.24■■□□□ 1.15
TNFSF11O14788 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.24■■□□□ 1.15
TNFSF11O14788 AC092296.2-201ENST00000589470 999 ntBASIC22.24■■□□□ 1.15
TNFSF11O14788 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TNFSF11O14788 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
TNFSF11O14788 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNFSF11O14788 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNFSF11O14788 AL157400.5-201ENST00000507624 621 ntBASIC22.23■■□□□ 1.15
TNFSF11O14788 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.23■■□□□ 1.15
TNFSF11O14788 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.23■■□□□ 1.15
TNFSF11O14788 RNF126P1-201ENST00000567452 1320 ntBASIC22.23■■□□□ 1.15
TNFSF11O14788 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF11O14788 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF11O14788 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF11O14788 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF11O14788 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF11O14788 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF11O14788 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF11O14788 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF11O14788 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF11O14788 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TNFSF11O14788 RARRES2P2-201ENST00000394842 485 ntBASIC22.2■■□□□ 1.14
TNFSF11O14788 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF11O14788 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TNFSF11O14788 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TNFSF11O14788 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNFSF11O14788 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.19■■□□□ 1.14
TNFSF11O14788 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNFSF11O14788 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TNFSF11O14788 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TNFSF11O14788 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.18■■□□□ 1.14
TNFSF11O14788 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.18■■□□□ 1.14
TNFSF11O14788 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNFSF11O14788 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNFSF11O14788 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNFSF11O14788 ECEL1P2-201ENST00000461596 1295 ntBASIC22.17■■□□□ 1.14
TNFSF11O14788 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNFSF11O14788 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TNFSF11O14788 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNFSF11O14788 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNFSF11O14788 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNFSF11O14788 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.16■■□□□ 1.14
TNFSF11O14788 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TNFSF11O14788 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNFSF11O14788 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.15■■□□□ 1.14
TNFSF11O14788 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TNFSF11O14788 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TNFSF11O14788 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TNFSF11O14788 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TNFSF11O14788 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TNFSF11O14788 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TNFSF11O14788 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.14■■□□□ 1.13
TNFSF11O14788 AL359504.2-201ENST00000605506 1601 ntBASIC22.13■■□□□ 1.13
TNFSF11O14788 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNFSF11O14788 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNFSF11O14788 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.13■■□□□ 1.13
TNFSF11O14788 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.13■■□□□ 1.13
TNFSF11O14788 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.13■■□□□ 1.13
TNFSF11O14788 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.13■■□□□ 1.13
TNFSF11O14788 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNFSF11O14788 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TNFSF11O14788 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.11■■□□□ 1.13
TNFSF11O14788 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
TNFSF11O14788 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFSF11O14788 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFSF11O14788 SMPD5-203ENST00000639008 1464 ntBASIC22.11■■□□□ 1.13
TNFSF11O14788 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.11■■□□□ 1.13
TNFSF11O14788 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.11■■□□□ 1.13
TNFSF11O14788 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFSF11O14788 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.1■■□□□ 1.13
TNFSF11O14788 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.1■■□□□ 1.13
TNFSF11O14788 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNFSF11O14788 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TNFSF11O14788 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms