Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
IFRD1O00458 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
IFRD1O00458 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
IFRD1O00458 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
IFRD1O00458 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
IFRD1O00458 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
IFRD1O00458 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
IFRD1O00458 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
IFRD1O00458 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
IFRD1O00458 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
IFRD1O00458 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.39■■□□□ 1.49
IFRD1O00458 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
IFRD1O00458 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.39■■□□□ 1.49
IFRD1O00458 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
IFRD1O00458 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
IFRD1O00458 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
IFRD1O00458 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
IFRD1O00458 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
IFRD1O00458 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
IFRD1O00458 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
IFRD1O00458 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
IFRD1O00458 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.37■■□□□ 1.49
IFRD1O00458 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.37■■□□□ 1.49
IFRD1O00458 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.37■■□□□ 1.49
IFRD1O00458 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
IFRD1O00458 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
IFRD1O00458 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFRD1O00458 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFRD1O00458 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.36■■□□□ 1.49
IFRD1O00458 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFRD1O00458 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IFRD1O00458 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
IFRD1O00458 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
IFRD1O00458 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
IFRD1O00458 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.35■■□□□ 1.49
IFRD1O00458 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
IFRD1O00458 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
IFRD1O00458 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
IFRD1O00458 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
IFRD1O00458 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.34■■□□□ 1.49
IFRD1O00458 AC022413.1-201ENST00000624602 984 ntBASIC24.34■■□□□ 1.49
IFRD1O00458 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
IFRD1O00458 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
IFRD1O00458 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
IFRD1O00458 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.33■■□□□ 1.49
IFRD1O00458 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
IFRD1O00458 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.33■■□□□ 1.49
IFRD1O00458 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.33■■□□□ 1.48
IFRD1O00458 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.32■■□□□ 1.48
IFRD1O00458 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.32■■□□□ 1.48
IFRD1O00458 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
IFRD1O00458 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.32■■□□□ 1.48
IFRD1O00458 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
IFRD1O00458 AL359258.2-201ENST00000564063 1566 ntBASIC24.32■■□□□ 1.48
IFRD1O00458 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
IFRD1O00458 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
IFRD1O00458 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
IFRD1O00458 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
IFRD1O00458 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
IFRD1O00458 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
IFRD1O00458 GPX1-201ENST00000419349 1106 ntBASIC24.3■■□□□ 1.48
IFRD1O00458 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
IFRD1O00458 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
IFRD1O00458 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.29■■□□□ 1.48
IFRD1O00458 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.29■■□□□ 1.48
IFRD1O00458 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
IFRD1O00458 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.29■■□□□ 1.48
IFRD1O00458 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
IFRD1O00458 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.28■■□□□ 1.48
IFRD1O00458 AC060814.1-201ENST00000554326 538 ntBASIC24.28■■□□□ 1.48
IFRD1O00458 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.28■■□□□ 1.48
IFRD1O00458 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
IFRD1O00458 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
IFRD1O00458 WHAMMP3-201ENST00000611636 1609 ntBASIC24.28■■□□□ 1.48
IFRD1O00458 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
IFRD1O00458 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.27■■□□□ 1.48
IFRD1O00458 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.27■■□□□ 1.48
IFRD1O00458 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
IFRD1O00458 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.27■■□□□ 1.48
IFRD1O00458 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.26■■□□□ 1.47
IFRD1O00458 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.26■■□□□ 1.47
IFRD1O00458 HSD17B1P1-201ENST00000590052 955 ntBASIC24.26■■□□□ 1.47
IFRD1O00458 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
IFRD1O00458 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.26■■□□□ 1.47
IFRD1O00458 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
IFRD1O00458 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.25■■□□□ 1.47
IFRD1O00458 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
IFRD1O00458 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
IFRD1O00458 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
IFRD1O00458 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
IFRD1O00458 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.24■■□□□ 1.47
IFRD1O00458 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.24■■□□□ 1.47
IFRD1O00458 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
IFRD1O00458 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
IFRD1O00458 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
IFRD1O00458 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.23■■□□□ 1.47
IFRD1O00458 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
IFRD1O00458 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
IFRD1O00458 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
IFRD1O00458 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms