Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRGV1A0A0A0MS02 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV1A0A0A0MS02 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
TRGV1A0A0A0MS02 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV1A0A0A0MS02 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV1A0A0A0MS02 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRGV1A0A0A0MS02 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TRGV1A0A0A0MS02 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV1A0A0A0MS02 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV1A0A0A0MS02 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.84■□□□□ 0.45
TRGV1A0A0A0MS02 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
TRGV1A0A0A0MS02 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRGV1A0A0A0MS02 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV1A0A0A0MS02 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV1A0A0A0MS02 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRGV1A0A0A0MS02 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRGV1A0A0A0MS02 CR559946.2-201ENST00000623684 991 ntBASIC17.83■□□□□ 0.44
TRGV1A0A0A0MS02 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV1A0A0A0MS02 WHAMMP3-201ENST00000611636 1609 ntBASIC17.83■□□□□ 0.44
TRGV1A0A0A0MS02 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 AL449106.1-201ENST00000608517 1980 ntBASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRGV1A0A0A0MS02 MIR7108-201ENST00000614319 87 ntBASIC17.81■□□□□ 0.44
TRGV1A0A0A0MS02 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.81■□□□□ 0.44
TRGV1A0A0A0MS02 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV1A0A0A0MS02 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV1A0A0A0MS02 MIR3648-2-201ENST00000581792 180 ntBASIC17.8■□□□□ 0.44
TRGV1A0A0A0MS02 MIR3648-1-201ENST00000615959 180 ntBASIC17.8■□□□□ 0.44
TRGV1A0A0A0MS02 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV1A0A0A0MS02 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV1A0A0A0MS02 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 MIR219A2-201ENST00000608502 1504 ntBASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV1A0A0A0MS02 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRGV1A0A0A0MS02 AP004609.3-201ENST00000610705 1884 ntBASIC17.78■□□□□ 0.44
TRGV1A0A0A0MS02 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV1A0A0A0MS02 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.78■□□□□ 0.44
TRGV1A0A0A0MS02 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRGV1A0A0A0MS02 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 HLA-V-202ENST00000446817 847 ntBASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 AC016575.1-201ENST00000607026 382 ntBASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 AC148477.6-201ENST00000623746 465 ntBASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRGV1A0A0A0MS02 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV1A0A0A0MS02 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV1A0A0A0MS02 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRGV1A0A0A0MS02 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.76■□□□□ 0.43
TRGV1A0A0A0MS02 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.76■□□□□ 0.43
TRGV1A0A0A0MS02 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.76■□□□□ 0.43
TRGV1A0A0A0MS02 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV1A0A0A0MS02 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV1A0A0A0MS02 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV1A0A0A0MS02 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.75■□□□□ 0.43
TRGV1A0A0A0MS02 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV1A0A0A0MS02 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV1A0A0A0MS02 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRGV1A0A0A0MS02 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRGV1A0A0A0MS02 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.74■□□□□ 0.43
TRGV1A0A0A0MS02 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRGV1A0A0A0MS02 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.74■□□□□ 0.43
TRGV1A0A0A0MS02 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRGV1A0A0A0MS02 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.74■□□□□ 0.43
TRGV1A0A0A0MS02 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRGV1A0A0A0MS02 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRGV1A0A0A0MS02 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRGV1A0A0A0MS02 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRGV1A0A0A0MS02 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRGV1A0A0A0MS02 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.72■□□□□ 0.43
TRGV1A0A0A0MS02 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms