Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.752e-15■□□□□ 8.5
LSM11P83369 ATG4D-204ENST00000586417 1752 ntTSL 218.86■□□□□ 0.612e-15■□□□□ 8.5
LSM11P83369 ATG4D-208ENST00000588667 1619 ntTSL 1 (best)17.97■□□□□ 0.472e-15■□□□□ 8.5
LSM11P83369 ATG4D-203ENST00000585752 729 ntTSL 516.31■□□□□ 0.22e-15■□□□□ 8.5
LSM11P83369 ATG4D-211ENST00000589753 931 ntTSL 1 (best)13.64□□□□□ -0.232e-15■□□□□ 8.5
LSM11P83369 ATG4D-207ENST00000587256 607 ntTSL 512.94□□□□□ -0.342e-15■□□□□ 8.5
LSM11P83369 ATG4D-206ENST00000586863 529 ntTSL 412.18□□□□□ -0.462e-15■□□□□ 8.5
LSM11P83369 ATG4D-210ENST00000588972 632 ntTSL 511.86□□□□□ -0.512e-15■□□□□ 8.5
LSM11P83369 LCAT-209ENST00000576450 359 ntTSL 210.45□□□□□ -0.741e-7■□□□□ 8.5
LSM11P83369 FANCA-207ENST00000561667 528 ntTSL 410.13□□□□□ -0.793e-14■□□□□ 8.5
LSM11P83369 LCAT-203ENST00000570396 322 ntTSL 38.57□□□□□ -1.041e-7■□□□□ 8.5
LSM11P83369 CCNL2-217ENST00000492998 745 ntTSL 315.84■□□□□ 0.131e-8■□□□□ 8.5
LSM11P83369 CCNL2-208ENST00000469113 707 ntTSL 311.96□□□□□ -0.491e-8■□□□□ 8.5
LSM11P83369 VWCE-206ENST00000538438 1076 ntTSL 313.77□□□□□ -0.218e-8■□□□□ 8.5
LSM11P83369 HSPG2-210ENST00000481644 839 ntTSL 216.3■□□□□ 0.27e-6■□□□□ 8.5
LSM11P83369 GGA1-212ENST00000439161 568 ntTSL 421.35■■□□□ 1.016e-8■□□□□ 8.5
LSM11P83369 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.32■■□□□ 13e-6■□□□□ 8.5
LSM11P83369 KLC1-211ENST00000538504 822 ntTSL 220.17■□□□□ 0.823e-6■□□□□ 8.5
LSM11P83369 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.96■□□□□ 0.633e-6■□□□□ 8.5
LSM11P83369 KLHDC2-207ENST00000555443 1756 ntTSL 218.9■□□□□ 0.626e-8■□□□□ 8.5
LSM11P83369 KLC1-226ENST00000557686 535 ntTSL 318.89■□□□□ 0.613e-6■□□□□ 8.5
LSM11P83369 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.84■□□□□ 0.616e-8■□□□□ 8.5
LSM11P83369 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.6■□□□□ 0.573e-6■□□□□ 8.5
LSM11P83369 GRAMD1A-214ENST00000603907 450 ntTSL 218.48■□□□□ 0.552e-13■□□□□ 8.5
LSM11P83369 SMTN-224ENST00000624247 1263 ntTSL 518.45■□□□□ 0.543e-6■□□□□ 8.5
LSM11P83369 KLHDC2-208ENST00000555739 1696 ntTSL 518.33■□□□□ 0.526e-8■□□□□ 8.5
LSM11P83369 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.456e-8■□□□□ 8.5
LSM11P83369 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.84■□□□□ 0.453e-6■□□□□ 8.5
LSM11P83369 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.18■□□□□ 0.343e-6■□□□□ 8.5
LSM11P83369 GGA1-214ENST00000449944 927 ntTSL 516.89■□□□□ 0.296e-8■□□□□ 8.5
LSM11P83369 GGA1-215ENST00000453208 639 ntTSL 516.22■□□□□ 0.196e-8■□□□□ 8.5
LSM11P83369 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.91■□□□□ 0.143e-6■□□□□ 8.5
LSM11P83369 EGFL8-224ENST00000489721 455 ntTSL 215.19■□□□□ 0.021e-6■□□□□ 8.5
LSM11P83369 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.66□□□□□ -0.066e-8■□□□□ 8.5
LSM11P83369 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.16e-8■□□□□ 8.5
LSM11P83369 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC14.18□□□□□ -0.143e-6■□□□□ 8.5
LSM11P83369 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.154e-12■□□□□ 8.5
LSM11P83369 SMTN-219ENST00000493335 2937 ntTSL 214.09□□□□□ -0.153e-6■□□□□ 8.5
LSM11P83369 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.186e-8■□□□□ 8.5
LSM11P83369 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.88□□□□□ -0.193e-6■□□□□ 8.5
LSM11P83369 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.24e-12■□□□□ 8.5
LSM11P83369 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.72□□□□□ -0.213e-6■□□□□ 8.5
LSM11P83369 HNRNPH3-211ENST00000491200 2308 ntTSL 1 (best)13.51□□□□□ -0.254e-12■□□□□ 8.5
LSM11P83369 FDPS-213ENST00000489003 976 ntTSL 213.47□□□□□ -0.253e-6■□□□□ 8.5
LSM11P83369 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.34□□□□□ -0.276e-8■□□□□ 8.5
LSM11P83369 FDPS-208ENST00000470171 746 ntTSL 213.33□□□□□ -0.283e-6■□□□□ 8.5
LSM11P83369 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.3□□□□□ -0.286e-8■□□□□ 8.5
LSM11P83369 SLC13A5-207ENST00000572727 618 ntTSL 213.13□□□□□ -0.316e-8■□□□□ 8.5
LSM11P83369 GGA1-210ENST00000429218 566 ntTSL 512.94□□□□□ -0.346e-8■□□□□ 8.5
LSM11P83369 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.93□□□□□ -0.346e-8■□□□□ 8.5
LSM11P83369 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC12.93□□□□□ -0.343e-6■□□□□ 8.5
LSM11P83369 HNRNPH3-206ENST00000478698 1507 ntTSL 212.89□□□□□ -0.354e-12■□□□□ 8.5
LSM11P83369 HNRNPH3-210ENST00000490442 1521 ntTSL 212.89□□□□□ -0.354e-12■□□□□ 8.5
LSM11P83369 FDPS-216ENST00000491013 912 ntTSL 512.81□□□□□ -0.363e-6■□□□□ 8.5
LSM11P83369 KLHDC2-203ENST00000553579 600 ntTSL 212.62□□□□□ -0.396e-8■□□□□ 8.5
LSM11P83369 HNRNPH3-208ENST00000481819 2704 ntTSL 1 (best)12.62□□□□□ -0.394e-12■□□□□ 8.5
LSM11P83369 SMTN-221ENST00000504335 2608 ntTSL 212.58□□□□□ -0.43e-6■□□□□ 8.5
LSM11P83369 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.43e-6■□□□□ 8.5
LSM11P83369 ANAPC5-203ENST00000422342 1141 ntTSL 212.52□□□□□ -0.416e-8■□□□□ 8.5
LSM11P83369 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.443e-6■□□□□ 8.5
LSM11P83369 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.453e-6■□□□□ 8.5
LSM11P83369 FDPS-207ENST00000468479 938 ntTSL 212.19□□□□□ -0.463e-6■□□□□ 8.5
LSM11P83369 FDPS-219ENST00000495308 808 ntTSL 212.03□□□□□ -0.483e-6■□□□□ 8.5
LSM11P83369 ANAPC5-209ENST00000535641 2627 ntTSL 211.16□□□□□ -0.626e-8■□□□□ 8.5
LSM11P83369 FDPS-204ENST00000461507 1022 ntTSL 211.13□□□□□ -0.633e-6■□□□□ 8.5
LSM11P83369 FDPS-211ENST00000477057 741 ntTSL 211.13□□□□□ -0.633e-6■□□□□ 8.5
LSM11P83369 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC11.01□□□□□ -0.656e-8■□□□□ 8.5
LSM11P83369 SMTN-218ENST00000489337 3560 ntTSL 210.95□□□□□ -0.663e-6■□□□□ 8.5
LSM11P83369 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC10.87□□□□□ -0.676e-8■□□□□ 8.5
LSM11P83369 SMTN-215ENST00000472911 543 ntTSL 210.69□□□□□ -0.73e-6■□□□□ 8.5
LSM11P83369 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC10.67□□□□□ -0.73e-6■□□□□ 8.5
LSM11P83369 KLHDC2-205ENST00000554115 437 ntTSL 210.52□□□□□ -0.736e-8■□□□□ 8.5
LSM11P83369 KLHDC2-209ENST00000556559 751 ntTSL 510.26□□□□□ -0.776e-8■□□□□ 8.5
LSM11P83369 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC10.07□□□□□ -0.86e-8■□□□□ 8.5
LSM11P83369 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC9.5□□□□□ -0.893e-6■□□□□ 8.5
LSM11P83369 HNRNPH3-205ENST00000469172 3356 ntTSL 29.47□□□□□ -0.894e-12■□□□□ 8.5
LSM11P83369 ANAPC5-205ENST00000534976 3165 ntTSL 59.45□□□□□ -0.96e-8■□□□□ 8.5
LSM11P83369 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC9.21□□□□□ -0.933e-6■□□□□ 8.5
LSM11P83369 AC005154.1-212ENST00000578245 1887 ntTSL 28.89□□□□□ -0.993e-6■□□□□ 8.5
LSM11P83369 JTB-204ENST00000428469 520 ntTSL 38.61□□□□□ -1.036e-8■□□□□ 8.5
LSM11P83369 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.053e-6■□□□□ 8.5
LSM11P83369 ANAPC5-219ENST00000544314 1508 ntTSL 28.24□□□□□ -1.096e-8■□□□□ 8.5
LSM11P83369 ANAPC5-214ENST00000539079 1715 ntTSL 1 (best)8.21□□□□□ -1.096e-8■□□□□ 8.5
LSM11P83369 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.14□□□□□ -1.116e-8■□□□□ 8.5
LSM11P83369 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC8.1□□□□□ -1.116e-8■□□□□ 8.5
LSM11P83369 USP34-219ENST00000492604 527 ntTSL 48.01□□□□□ -1.133e-6■□□□□ 8.5
LSM11P83369 C16orf70-207ENST00000569277 519 ntTSL 37.97□□□□□ -1.136e-8■□□□□ 8.5
LSM11P83369 FDPS-218ENST00000492887 554 ntTSL 27.77□□□□□ -1.173e-6■□□□□ 8.5
LSM11P83369 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.67□□□□□ -1.183e-6■□□□□ 8.5
LSM11P83369 FDPS-209ENST00000471117 630 ntTSL 37.65□□□□□ -1.183e-6■□□□□ 8.5
LSM11P83369 CA5A-202ENST00000566402 725 ntTSL 26.98□□□□□ -1.293e-6■□□□□ 8.5
LSM11P83369 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.88□□□□□ -1.316e-8■□□□□ 8.5
LSM11P83369 AC005154.1-210ENST00000426529 4034 ntTSL 56.85□□□□□ -1.313e-6■□□□□ 8.5
LSM11P83369 USP34-203ENST00000436269 1827 ntTSL 56.41□□□□□ -1.383e-6■□□□□ 8.5
LSM11P83369 GGA1-208ENST00000413251 565 ntTSL 55.91□□□□□ -1.466e-8■□□□□ 8.5
LSM11P83369 GGA1-209ENST00000423024 559 ntTSL 35.91□□□□□ -1.466e-8■□□□□ 8.5
LSM11P83369 AC005154.1-209ENST00000355837 14667 ntTSL 25.55□□□□□ -1.523e-6■□□□□ 8.5
LSM11P83369 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.763e-6■□□□□ 8.5
LSM11P83369 USP34-202ENST00000411912 4309 ntTSL 53.47□□□□□ -1.853e-6■□□□□ 8.5
LSM11P83369 AP1G1-220ENST00000570017 814 ntTSL 417.91■□□□□ 0.466e-7■□□□□ 8.5
Retrieved 100 of 11,495 protein–RNA pairs in 332.1 ms