RNA–Protein interactions for RNA: ENST00000398571.6

USP34-201, Transcript of ubiquitin specific peptidase 34, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP34, Length 11,357 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-201ENST00000398571 NISCHQ9Y2I1 1504 aa9.51□□□□□ -0.89
USP34-201ENST00000398571 CCDC180Q9P1Z9 1646 aa8.45□□□□□ -1.06
USP34-201ENST00000398571 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
USP34-201ENST00000398571 MYO15BQ96JP2 1530 aa8.21□□□□□ -1.1
USP34-201ENST00000398571 ZCCHC6Q5VYS8 1495 aaKnown RBP8.14□□□□□ -1.11
USP34-201ENST00000398571 NACADO15069 1562 aa7.66□□□□□ -1.18
USP34-201ENST00000398571 SHROOM4Q9ULL8 1493 aa7.66□□□□□ -1.18
USP34-201ENST00000398571 ABCC9O60706 1549 aa7.63□□□□□ -1.19
USP34-201ENST00000398571 RB1CC1Q8TDY2 1594 aa7.5□□□□□ -1.21
USP34-201ENST00000398571 PEG3Q9GZU2 1588 aa7.46□□□□□ -1.22
USP34-201ENST00000398571 BAZ1AQ9NRL2 1556 aaPredicted RBP7.44□□□□□ -1.22
USP34-201ENST00000398571 RSF1Q96T23 1441 aaPredicted RBP7.35□□□□□ -1.23
USP34-201ENST00000398571 CHIC1Q5VXU3 224 aa7.33□□□□□ -1.24
USP34-201ENST00000398571 EEA1Q15075 1411 aa7.32□□□□□ -1.24
USP34-201ENST00000398571 HRCP23327 699 aa7.32□□□□□ -1.24
USP34-201ENST00000398571 EIF4G1Q04637 1599 aaKnown RBP7.3□□□□□ -1.24
USP34-201ENST00000398571 TOP2AP11388 1531 aaKnown RBP7.24□□□□□ -1.25
USP34-201ENST00000398571 SMARCA2P51531 1590 aa7.23□□□□□ -1.25
USP34-201ENST00000398571 WRNQ14191 1432 aaPredicted RBP eCLIP7.21□□□□□ -1.26
USP34-201ENST00000398571 SMARCA4P51532 1647 aa7.21□□□□□ -1.26
USP34-201ENST00000398571 HMGXB3Q12766 1538 aa7.17□□□□□ -1.26
USP34-201ENST00000398571 SUPT5HO00267 1087 aaKnown RBP7.16□□□□□ -1.26
USP34-201ENST00000398571 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
USP34-201ENST00000398571 SCRIBQ14160 1630 aa7.16□□□□□ -1.26
USP34-201ENST00000398571 MROH2BQ7Z745 1585 aa7.15□□□□□ -1.26
USP34-201ENST00000398571 BAZ1BQ9UIG0 1483 aaKnown RBP7.09□□□□□ -1.27
USP34-201ENST00000398571 TRIM26Q12899 539 aaPredicted RBP7.09□□□□□ -1.27
USP34-201ENST00000398571 KIF21BO75037 1637 aa7.08□□□□□ -1.28
USP34-201ENST00000398571 UNC13AQ9UPW8 1703 aa7.07□□□□□ -1.28
USP34-201ENST00000398571 BICRAQ9NZM4 1560 aa7.07□□□□□ -1.28
USP34-201ENST00000398571 CLSPNQ9HAW4 1339 aa7.07□□□□□ -1.28
USP34-201ENST00000398571 ERICH3Q5RHP9 1530 aa7.07□□□□□ -1.28
USP34-201ENST00000398571 BIVM-ERCC5R4GMW8 1640 aa7.06□□□□□ -1.28
USP34-201ENST00000398571 WIZO95785 1651 aa7.04□□□□□ -1.28
USP34-201ENST00000398571 CECR2Q9BXF3 1484 aa7.04□□□□□ -1.28
USP34-201ENST00000398571 NCAPD3P42695 1498 aa7.02□□□□□ -1.29
USP34-201ENST00000398571 TNIKQ9UKE5 1360 aa7.01□□□□□ -1.29
USP34-201ENST00000398571 CEP164Q9UPV0 1460 aa7.01□□□□□ -1.29
USP34-201ENST00000398571 MAP3K1Q13233 1512 aa7□□□□□ -1.29
USP34-201ENST00000398571 PRDM2Q13029 1718 aa6.99□□□□□ -1.29
USP34-201ENST00000398571 PCGF6Q9BYE7 350 aa6.99□□□□□ -1.29
USP34-201ENST00000398571 TOP2BQ02880 1626 aa6.99□□□□□ -1.29
USP34-201ENST00000398571 GOLGA3Q08378 1498 aa6.98□□□□□ -1.29
USP34-201ENST00000398571 TRIM41Q8WV44 630 aa6.96□□□□□ -1.3
USP34-201ENST00000398571 CCDC88BA6NC98 1476 aa6.95□□□□□ -1.3
USP34-201ENST00000398571 ATAD2BQ9ULI0 1458 aa6.95□□□□□ -1.3
USP34-201ENST00000398571 LOC105371045A0A1W2PR82 267 aa6.93□□□□□ -1.3
USP34-201ENST00000398571 ACIN1Q9UKV3 1341 aaKnown RBP6.93□□□□□ -1.3
USP34-201ENST00000398571 CFTRP13569 1480 aa6.93□□□□□ -1.3
USP34-201ENST00000398571 PPARGC1BQ86YN6 1023 aaKnown RBP6.92□□□□□ -1.3
USP34-201ENST00000398571 WDR97A6NE52 1622 aa6.92□□□□□ -1.3
USP34-201ENST00000398571 PRXQ9BXM0 1461 aa6.9□□□□□ -1.3
USP34-201ENST00000398571 ABCC8Q09428 1581 aa6.9□□□□□ -1.3
USP34-201ENST00000398571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.88□□□□□ -1.318e-7■■■■■ 32.9
USP34-201ENST00000398571 CUX2O14529 1486 aa6.86□□□□□ -1.31
USP34-201ENST00000398571 DCAF8L2P0C7V8 631 aa6.86□□□□□ -1.31
USP34-201ENST00000398571 THOC2Q8NI27 1593 aaKnown RBP6.86□□□□□ -1.31
USP34-201ENST00000398571 VPS8Q8N3P4 1428 aa6.86□□□□□ -1.31
USP34-201ENST00000398571 CEP162Q5TB80 1403 aa6.85□□□□□ -1.31
USP34-201ENST00000398571 SYNJ1O43426 1573 aa6.83□□□□□ -1.32
USP34-201ENST00000398571 CC2D2AQ9P2K1 1620 aa6.83□□□□□ -1.32
USP34-201ENST00000398571 TIMELESSQ9UNS1 1208 aa6.83□□□□□ -1.32
USP34-201ENST00000398571 PELP1Q8IZL8 1130 aaKnown RBP6.83□□□□□ -1.32
USP34-201ENST00000398571 CUL7Q14999 1698 aa6.81□□□□□ -1.32
USP34-201ENST00000398571 LAMC3Q9Y6N6 1575 aa6.81□□□□□ -1.32
USP34-201ENST00000398571 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
USP34-201ENST00000398571 EFCAB5A4FU69 1503 aa6.8□□□□□ -1.32
USP34-201ENST00000398571 AQRO60306 1485 aaKnown RBP eCLIP6.8□□□□□ -1.322e-7■■■■□ 20.1
USP34-201ENST00000398571 RRBP1Q9P2E9 1410 aaKnown RBP6.79□□□□□ -1.32
USP34-201ENST00000398571 FHAD1B1AJZ9 1412 aa6.77□□□□□ -1.33
USP34-201ENST00000398571 CSRNP3Q8WYN3 585 aa6.77□□□□□ -1.33
USP34-201ENST00000398571 KIF27Q86VH2 1401 aa6.76□□□□□ -1.33
USP34-201ENST00000398571 SCAF1Q9H7N4 1312 aaKnown RBP6.75□□□□□ -1.33
USP34-201ENST00000398571 MYT1Q01538 1121 aa6.73□□□□□ -1.33
USP34-201ENST00000398571 ABCA10Q8WWZ4 1543 aa6.72□□□□□ -1.33
USP34-201ENST00000398571 CLIP1P30622 1438 aa6.72□□□□□ -1.33
USP34-201ENST00000398571 AKNAQ7Z591 1439 aa6.72□□□□□ -1.33
USP34-201ENST00000398571 CFAP43Q8NDM7 1665 aa6.72□□□□□ -1.33
USP34-201ENST00000398571 DNMBPQ6XZF7 1577 aa6.72□□□□□ -1.33
USP34-201ENST00000398571 CADPSQ9ULU8 1353 aa6.7□□□□□ -1.34
USP34-201ENST00000398571 SOGA1O94964 1423 aa6.69□□□□□ -1.34
USP34-201ENST00000398571 FYCO1Q9BQS8 1478 aa6.69□□□□□ -1.34
USP34-201ENST00000398571 TIAM1Q13009 1591 aa6.68□□□□□ -1.34
USP34-201ENST00000398571 CTTNBP2Q8WZ74 1663 aa6.67□□□□□ -1.34
USP34-201ENST00000398571 FMN1Q68DA7 1419 aa6.66□□□□□ -1.34
USP34-201ENST00000398571 RAPGEF2Q9Y4G8 1499 aa6.66□□□□□ -1.34
USP34-201ENST00000398571 ABCA5Q8WWZ7 1642 aa6.66□□□□□ -1.34
USP34-201ENST00000398571 CUX1P39880 1505 aa6.66□□□□□ -1.34
USP34-201ENST00000398571 SAMD9Q5K651 1589 aa6.65□□□□□ -1.34
USP34-201ENST00000398571 ARHGEF11O15085 1522 aa6.65□□□□□ -1.35
USP34-201ENST00000398571 CCDC18Q5T9S5 1454 aa6.64□□□□□ -1.35
USP34-201ENST00000398571 ARHGAP35Q9NRY4 1499 aa6.64□□□□□ -1.35
USP34-201ENST00000398571 RUSC2Q8N2Y8 1516 aa6.62□□□□□ -1.35
USP34-201ENST00000398571 NEUROD1Q13562 356 aa6.62□□□□□ -1.35
USP34-201ENST00000398571 FGD5Q6ZNL6 1462 aa6.61□□□□□ -1.35
USP34-201ENST00000398571 CENPBP07199 599 aaPredicted RBP6.6□□□□□ -1.35
USP34-201ENST00000398571 MIA2Q96PC5 1412 aa6.59□□□□□ -1.35
USP34-201ENST00000398571 LRRC9Q6ZRR7 1453 aa6.59□□□□□ -1.35
USP34-201ENST00000398571 ARAP1Q96P48 1450 aa6.59□□□□□ -1.35
USP34-201ENST00000398571 POLA1P09884 1462 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms