RNA–Protein interactions for RNA: ENST00000624247.1

SMTN-224, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-224ENST00000624247 NISCHQ9Y2I1 1504 aa52.52■■■■■ 6
SMTN-224ENST00000624247 CCDC180Q9P1Z9 1646 aa46.9■■■■■ 5.1
SMTN-224ENST00000624247 ABCC9O60706 1549 aa46.38■■■■■ 5.02
SMTN-224ENST00000624247 RB1CC1Q8TDY2 1594 aa44.35■■■■■ 4.69
SMTN-224ENST00000624247 NACADO15069 1562 aa44.15■■■■■ 4.66
SMTN-224ENST00000624247 DCAF8L2P0C7V8 631 aa44.12■■■■■ 4.65
SMTN-224ENST00000624247 MYO15BQ96JP2 1530 aa43.68■■■■■ 4.58
SMTN-224ENST00000624247 ZCCHC6Q5VYS8 1495 aaKnown RBP43.67■■■■■ 4.58
SMTN-224ENST00000624247 UNC13AQ9UPW8 1703 aa43.45■■■■■ 4.55
SMTN-224ENST00000624247 DCAF1Q9Y4B6 1507 aa43.36■■■■■ 4.53
SMTN-224ENST00000624247 PABPN1Q86U42 306 aaKnown RBP eCLIP43.26■■■■■ 4.523e-10■■■■□ 19.6
SMTN-224ENST00000624247 BICRAQ9NZM4 1560 aa43.07■■■■■ 4.49
SMTN-224ENST00000624247 DNAJC5BQ9UF47 199 aa42.96■■■■■ 4.47
SMTN-224ENST00000624247 SCRIBQ14160 1630 aa42.86■■■■■ 4.45
SMTN-224ENST00000624247 SHROOM4Q9ULL8 1493 aa42.43■■■■■ 4.38
SMTN-224ENST00000624247 EIF4G1Q04637 1599 aaKnown RBP41.96■■■■■ 4.31
SMTN-224ENST00000624247 CC2D2AQ9P2K1 1620 aa41.91■■■■■ 4.3
SMTN-224ENST00000624247 CECR2Q9BXF3 1484 aa41.68■■■■■ 4.26
SMTN-224ENST00000624247 SMARCA4P51532 1647 aa40.89■■■■■ 4.14
SMTN-224ENST00000624247 ATAD2BQ9ULI0 1458 aa40.74■■■■■ 4.11
SMTN-224ENST00000624247 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
SMTN-224ENST00000624247 BAZ1AQ9NRL2 1556 aaPredicted RBP40.73■■■■■ 4.11
SMTN-224ENST00000624247 SMARCA2P51531 1590 aa40.65■■■■■ 4.1
SMTN-224ENST00000624247 HMGXB3Q12766 1538 aa40.53■■■■■ 4.08
SMTN-224ENST00000624247 MROH2BQ7Z745 1585 aa40.52■■■■■ 4.08
SMTN-224ENST00000624247 PEG3Q9GZU2 1588 aa40.43■■■■■ 4.06
SMTN-224ENST00000624247 BAZ1BQ9UIG0 1483 aaKnown RBP40.4■■■■■ 4.06
SMTN-224ENST00000624247 WIZO95785 1651 aa40.1■■■■■ 4.01
SMTN-224ENST00000624247 NESP48681 1621 aa40.03■■■■■ 4
SMTN-224ENST00000624247 ERCC6Q03468 1493 aa39.98■■■■□ 3.99
SMTN-224ENST00000624247 RSF1Q96T23 1441 aaPredicted RBP39.86■■■■□ 3.97
SMTN-224ENST00000624247 LAMC3Q9Y6N6 1575 aa39.76■■■■□ 3.96
SMTN-224ENST00000624247 CUX2O14529 1486 aa39.65■■■■□ 3.94
SMTN-224ENST00000624247 TOP2AP11388 1531 aaKnown RBP39.59■■■■□ 3.93
SMTN-224ENST00000624247 KIF21AQ7Z4S6 1674 aa39.56■■■■□ 3.92
SMTN-224ENST00000624247 CADPSQ9ULU8 1353 aa39.54■■■■□ 3.92
SMTN-224ENST00000624247 THOC2Q8NI27 1593 aaKnown RBP39.5■■■■□ 3.91
SMTN-224ENST00000624247 PDS5BQ9NTI5 1447 aa39.48■■■■□ 3.91
SMTN-224ENST00000624247 CFTRP13569 1480 aa39.22■■■■□ 3.87
SMTN-224ENST00000624247 MRC2Q9UBG0 1479 aa39.16■■■■□ 3.86
SMTN-224ENST00000624247 FANCD2Q9BXW9 1451 aa39.13■■■■□ 3.85
SMTN-224ENST00000624247 CCDC88BA6NC98 1476 aa39.12■■■■□ 3.85
SMTN-224ENST00000624247 CEP164Q9UPV0 1460 aa39.12■■■■□ 3.85
SMTN-224ENST00000624247 WDR62O43379 1518 aa39.04■■■■□ 3.84
SMTN-224ENST00000624247 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
SMTN-224ENST00000624247 DNAJC5Q9H3Z4 198 aa38.94■■■■□ 3.82
SMTN-224ENST00000624247 URB2Q14146 1524 aaKnown RBP38.8■■■■□ 3.8
SMTN-224ENST00000624247 SUPT5HO00267 1087 aaKnown RBP38.57■■■■□ 3.76
SMTN-224ENST00000624247 TOPBP1Q92547 1522 aa38.47■■■■□ 3.75
SMTN-224ENST00000624247 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
SMTN-224ENST00000624247 ABCC8Q09428 1581 aa38.33■■■■□ 3.73
SMTN-224ENST00000624247 IFT140Q96RY7 1462 aa38.29■■■■□ 3.72
SMTN-224ENST00000624247 ZNF608Q9ULD9 1512 aaPredicted RBP38.24■■■■□ 3.71
SMTN-224ENST00000624247 POLA1P09884 1462 aaPredicted RBP38.11■■■■□ 3.69
SMTN-224ENST00000624247 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
SMTN-224ENST00000624247 EIF4G3O43432 1585 aaKnown RBP38.08■■■■□ 3.69
SMTN-224ENST00000624247 CUX1P39880 1505 aa38.04■■■■□ 3.68
SMTN-224ENST00000624247 RAD54L2Q9Y4B4 1467 aa38■■■■□ 3.67
SMTN-224ENST00000624247 FGD5Q6ZNL6 1462 aa37.97■■■■□ 3.67
SMTN-224ENST00000624247 AQRO60306 1485 aaKnown RBP eCLIP37.95■■■■□ 3.676e-8■■■■■ 63.8
SMTN-224ENST00000624247 SOGA1O94964 1423 aa37.92■■■■□ 3.66
SMTN-224ENST00000624247 OSCARQ8IYS5 282 aa37.91■■■■□ 3.66
SMTN-224ENST00000624247 TDRD9Q8NDG6 1382 aaKnown RBP37.8■■■■□ 3.64
SMTN-224ENST00000624247 CHD1O14646 1710 aa37.71■■■■□ 3.63
SMTN-224ENST00000624247 WDR97A6NE52 1622 aa37.71■■■■□ 3.63
SMTN-224ENST00000624247 SNAPC4Q5SXM2 1469 aa37.6■■■■□ 3.61
SMTN-224ENST00000624247 SYNJ1O43426 1573 aa37.59■■■■□ 3.61
SMTN-224ENST00000624247 WRNQ14191 1432 aaPredicted RBP eCLIP37.59■■■■□ 3.61
SMTN-224ENST00000624247 BIVM-ERCC5R4GMW8 1640 aa37.58■■■■□ 3.61
SMTN-224ENST00000624247 FBLN2P98095 1184 aa37.58■■■■□ 3.61
SMTN-224ENST00000624247 TRIM41Q8WV44 630 aa37.58■■■■□ 3.61
SMTN-224ENST00000624247 TOP2BQ02880 1626 aa37.57■■■■□ 3.6
SMTN-224ENST00000624247 ABCA10Q8WWZ4 1543 aa37.54■■■■□ 3.6
SMTN-224ENST00000624247 GRIN2BQ13224 1484 aa37.52■■■■□ 3.6
SMTN-224ENST00000624247 PBRM1Q86U86 1689 aa37.51■■■■□ 3.6
SMTN-224ENST00000624247 GAPVD1Q14C86 1478 aa37.49■■■■□ 3.59
SMTN-224ENST00000624247 ABCA5Q8WWZ7 1642 aa37.48■■■■□ 3.59
SMTN-224ENST00000624247 RIMBP3CA6NJZ7 1639 aa37.47■■■■□ 3.59
SMTN-224ENST00000624247 RIMBP3BA6NNM3 1639 aa37.47■■■■□ 3.59
SMTN-224ENST00000624247 RIMBP3Q9UFD9 1639 aa37.47■■■■□ 3.59
SMTN-224ENST00000624247 MAGI1Q96QZ7 1491 aaPredicted RBP37.46■■■■□ 3.59
SMTN-224ENST00000624247 ARHGEF11O15085 1522 aa37.39■■■■□ 3.58
SMTN-224ENST00000624247 CHMP7Q8WUX9 453 aaPredicted RBP37.35■■■■□ 3.57
SMTN-224ENST00000624247 SYNJ2O15056 1496 aa37.33■■■■□ 3.57
SMTN-224ENST00000624247 CLASP1Q7Z460 1538 aa37.23■■■■□ 3.55
SMTN-224ENST00000624247 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
SMTN-224ENST00000624247 ERICH3Q5RHP9 1530 aa37.07■■■■□ 3.53
SMTN-224ENST00000624247 GRIN2AQ12879 1464 aa37.07■■■■□ 3.52
SMTN-224ENST00000624247 ARAP1Q96P48 1450 aa37.07■■■■□ 3.52
SMTN-224ENST00000624247 CYB5RLQ6IPT4 315 aa37.04■■■■□ 3.52
SMTN-224ENST00000624247 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
SMTN-224ENST00000624247 CEP170Q5SW79 1584 aa36.95■■■■□ 3.51
SMTN-224ENST00000624247 NUP160Q12769 1436 aa36.9■■■■□ 3.5
SMTN-224ENST00000624247 KIF27Q86VH2 1401 aa36.81■■■■□ 3.48
SMTN-224ENST00000624247 ERCC6L2Q5T890 1561 aa36.76■■■■□ 3.48
SMTN-224ENST00000624247 IGF1RP08069 1367 aa36.72■■■■□ 3.47
SMTN-224ENST00000624247 SHROOM2Q13796 1616 aa36.7■■■■□ 3.47
SMTN-224ENST00000624247 CUL7Q14999 1698 aa36.68■■■■□ 3.46
SMTN-224ENST00000624247 RUSC2Q8N2Y8 1516 aa36.63■■■■□ 3.45
SMTN-224ENST00000624247 PRG4Q92954 1404 aaPredicted RBP36.51■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms