RNA–Protein interactions for RNA: ENST00000538438.1

VWCE-206, Transcript of von Willebrand factor C and EGF domains, humanhuman

TSL 3

Gene VWCE, Length 1,076 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWCE-206ENST00000538438 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
VWCE-206ENST00000538438 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
VWCE-206ENST00000538438 ABCC9O60706 1549 aa34.4■■■■□ 3.1
VWCE-206ENST00000538438 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
VWCE-206ENST00000538438 NACADO15069 1562 aa32.96■■■□□ 2.87
VWCE-206ENST00000538438 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
VWCE-206ENST00000538438 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
VWCE-206ENST00000538438 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
VWCE-206ENST00000538438 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
VWCE-206ENST00000538438 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
VWCE-206ENST00000538438 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.725e-20■□□□□ 10.1
VWCE-206ENST00000538438 BICRAQ9NZM4 1560 aa31.95■■■□□ 2.71
VWCE-206ENST00000538438 SCRIBQ14160 1630 aa31.85■■■□□ 2.69
VWCE-206ENST00000538438 SHROOM4Q9ULL8 1493 aa31.76■■■□□ 2.67
VWCE-206ENST00000538438 DNAJC5BQ9UF47 199 aa31.66■■■□□ 2.66
VWCE-206ENST00000538438 EIF4G1Q04637 1599 aaKnown RBP31.2■■■□□ 2.58
VWCE-206ENST00000538438 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
VWCE-206ENST00000538438 CECR2Q9BXF3 1484 aa30.97■■■□□ 2.55
VWCE-206ENST00000538438 SMARCA4P51532 1647 aa30.45■■■□□ 2.47
VWCE-206ENST00000538438 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
VWCE-206ENST00000538438 SMARCA2P51531 1590 aa30.36■■■□□ 2.45
VWCE-206ENST00000538438 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
VWCE-206ENST00000538438 ATAD2BQ9ULI0 1458 aa30.3■■■□□ 2.44
VWCE-206ENST00000538438 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
VWCE-206ENST00000538438 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
VWCE-206ENST00000538438 BAZ1BQ9UIG0 1483 aaKnown RBP30.11■■■□□ 2.41
VWCE-206ENST00000538438 MROH2BQ7Z745 1585 aa30.08■■■□□ 2.41
VWCE-206ENST00000538438 WIZO95785 1651 aa29.8■■■□□ 2.36
VWCE-206ENST00000538438 ERCC6Q03468 1493 aa29.77■■■□□ 2.36
VWCE-206ENST00000538438 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
VWCE-206ENST00000538438 NESP48681 1621 aa29.63■■■□□ 2.33
VWCE-206ENST00000538438 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
VWCE-206ENST00000538438 CUX2O14529 1486 aa29.55■■■□□ 2.32
VWCE-206ENST00000538438 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
VWCE-206ENST00000538438 PDS5BQ9NTI5 1447 aa29.47■■■□□ 2.31
VWCE-206ENST00000538438 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
VWCE-206ENST00000538438 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
VWCE-206ENST00000538438 THOC2Q8NI27 1593 aaKnown RBP29.34■■■□□ 2.29
VWCE-206ENST00000538438 CFTRP13569 1480 aa29.2■■■□□ 2.26
VWCE-206ENST00000538438 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
VWCE-206ENST00000538438 MRC2Q9UBG0 1479 aa29.16■■■□□ 2.26
VWCE-206ENST00000538438 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
VWCE-206ENST00000538438 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
VWCE-206ENST00000538438 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
VWCE-206ENST00000538438 WDR62O43379 1518 aa29.05■■■□□ 2.24
VWCE-206ENST00000538438 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
VWCE-206ENST00000538438 URB2Q14146 1524 aaKnown RBP28.79■■■□□ 2.2
VWCE-206ENST00000538438 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
VWCE-206ENST00000538438 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
VWCE-206ENST00000538438 TOPBP1Q92547 1522 aa28.62■■■□□ 2.17
VWCE-206ENST00000538438 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
VWCE-206ENST00000538438 IFT140Q96RY7 1462 aa28.55■■■□□ 2.16
VWCE-206ENST00000538438 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
VWCE-206ENST00000538438 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
VWCE-206ENST00000538438 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
VWCE-206ENST00000538438 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
VWCE-206ENST00000538438 CUX1P39880 1505 aa28.26■■■□□ 2.11
VWCE-206ENST00000538438 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
VWCE-206ENST00000538438 FGD5Q6ZNL6 1462 aa28.25■■■□□ 2.11
VWCE-206ENST00000538438 SOGA1O94964 1423 aa28.24■■■□□ 2.11
VWCE-206ENST00000538438 WDR97A6NE52 1622 aa28.22■■■□□ 2.11
VWCE-206ENST00000538438 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
VWCE-206ENST00000538438 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.12e-8■□□□□ 9.6
VWCE-206ENST00000538438 CHD1O14646 1710 aa28.06■■■□□ 2.08
VWCE-206ENST00000538438 TDRD9Q8NDG6 1382 aaKnown RBP28.06■■■□□ 2.08
VWCE-206ENST00000538438 BIVM-ERCC5R4GMW8 1640 aa28.04■■■□□ 2.08
VWCE-206ENST00000538438 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
VWCE-206ENST00000538438 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
VWCE-206ENST00000538438 GRIN2BQ13224 1484 aa27.98■■■□□ 2.07
VWCE-206ENST00000538438 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
VWCE-206ENST00000538438 PBRM1Q86U86 1689 aa27.97■■■□□ 2.07
VWCE-206ENST00000538438 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.07
VWCE-206ENST00000538438 FBLN2P98095 1184 aa27.94■■■□□ 2.06
VWCE-206ENST00000538438 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
VWCE-206ENST00000538438 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
VWCE-206ENST00000538438 GAPVD1Q14C86 1478 aa27.93■■■□□ 2.06
VWCE-206ENST00000538438 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
VWCE-206ENST00000538438 CHMP7Q8WUX9 453 aaPredicted RBP27.85■■■□□ 2.05
VWCE-206ENST00000538438 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
VWCE-206ENST00000538438 SYNJ2O15056 1496 aa27.83■■■□□ 2.04
VWCE-206ENST00000538438 RIMBP3CA6NJZ7 1639 aa27.82■■■□□ 2.04
VWCE-206ENST00000538438 RIMBP3BA6NNM3 1639 aa27.82■■■□□ 2.04
VWCE-206ENST00000538438 RIMBP3Q9UFD9 1639 aa27.82■■■□□ 2.04
VWCE-206ENST00000538438 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
VWCE-206ENST00000538438 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
VWCE-206ENST00000538438 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
VWCE-206ENST00000538438 ADAMTS12P58397 1594 aa27.66■■■□□ 2.02
VWCE-206ENST00000538438 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
VWCE-206ENST00000538438 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
VWCE-206ENST00000538438 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
VWCE-206ENST00000538438 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
VWCE-206ENST00000538438 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
VWCE-206ENST00000538438 NUP160Q12769 1436 aa27.46■■□□□ 1.99
VWCE-206ENST00000538438 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
VWCE-206ENST00000538438 CUL7Q14999 1698 aa27.44■■□□□ 1.98
VWCE-206ENST00000538438 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
VWCE-206ENST00000538438 IGF1RP08069 1367 aa27.32■■□□□ 1.96
VWCE-206ENST00000538438 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
VWCE-206ENST00000538438 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
VWCE-206ENST00000538438 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms