RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-222ENST00000612341 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
SMTN-222ENST00000612341 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
SMTN-222ENST00000612341 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
SMTN-222ENST00000612341 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
SMTN-222ENST00000612341 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
SMTN-222ENST00000612341 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
SMTN-222ENST00000612341 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
SMTN-222ENST00000612341 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
SMTN-222ENST00000612341 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
SMTN-222ENST00000612341 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
SMTN-222ENST00000612341 ABCC9O60706 1549 aa21.3■■□□□ 1
SMTN-222ENST00000612341 LOC105371045A0A1W2PR82 267 aa21.27■□□□□ 0.99
SMTN-222ENST00000612341 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
SMTN-222ENST00000612341 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
SMTN-222ENST00000612341 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
SMTN-222ENST00000612341 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
SMTN-222ENST00000612341 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
SMTN-222ENST00000612341 HRCP23327 699 aa20.93■□□□□ 0.94
SMTN-222ENST00000612341 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
SMTN-222ENST00000612341 NACADO15069 1562 aa20.89■□□□□ 0.93
SMTN-222ENST00000612341 RB1CC1Q8TDY2 1594 aa20.88■□□□□ 0.93
SMTN-222ENST00000612341 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
SMTN-222ENST00000612341 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
SMTN-222ENST00000612341 WIZO95785 1651 aa20.63■□□□□ 0.89
SMTN-222ENST00000612341 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
SMTN-222ENST00000612341 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.87
SMTN-222ENST00000612341 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.873e-10■■■■□ 19.6
SMTN-222ENST00000612341 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
SMTN-222ENST00000612341 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
SMTN-222ENST00000612341 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
SMTN-222ENST00000612341 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
SMTN-222ENST00000612341 TTBK1Q5TCY1 1321 aaPredicted RBP20.22■□□□□ 0.83
SMTN-222ENST00000612341 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
SMTN-222ENST00000612341 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
SMTN-222ENST00000612341 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
SMTN-222ENST00000612341 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
SMTN-222ENST00000612341 SOGA1O94964 1423 aa20.07■□□□□ 0.8
SMTN-222ENST00000612341 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
SMTN-222ENST00000612341 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
SMTN-222ENST00000612341 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
SMTN-222ENST00000612341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
SMTN-222ENST00000612341 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
SMTN-222ENST00000612341 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
SMTN-222ENST00000612341 MYT1Q01538 1121 aa19.92■□□□□ 0.78
SMTN-222ENST00000612341 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
SMTN-222ENST00000612341 CCER1Q8TC90 406 aaPredicted RBP19.89■□□□□ 0.78
SMTN-222ENST00000612341 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
SMTN-222ENST00000612341 RANGAP1P46060 587 aaPredicted RBP19.87■□□□□ 0.77
SMTN-222ENST00000612341 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.77
SMTN-222ENST00000612341 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
SMTN-222ENST00000612341 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
SMTN-222ENST00000612341 EEA1Q15075 1411 aa19.75■□□□□ 0.75
SMTN-222ENST00000612341 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
SMTN-222ENST00000612341 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
SMTN-222ENST00000612341 GOLGA3Q08378 1498 aa19.71■□□□□ 0.75
SMTN-222ENST00000612341 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
SMTN-222ENST00000612341 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
SMTN-222ENST00000612341 CLIP1P30622 1438 aa19.57■□□□□ 0.72
SMTN-222ENST00000612341 APLP2Q06481 763 aa19.55■□□□□ 0.72
SMTN-222ENST00000612341 RAPGEF2Q9Y4G8 1499 aa19.55■□□□□ 0.72
SMTN-222ENST00000612341 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
SMTN-222ENST00000612341 KIF21BO75037 1637 aa19.43■□□□□ 0.7
SMTN-222ENST00000612341 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
SMTN-222ENST00000612341 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
SMTN-222ENST00000612341 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
SMTN-222ENST00000612341 TOP2BQ02880 1626 aa19.39■□□□□ 0.69
SMTN-222ENST00000612341 CUX1P39880 1505 aa19.31■□□□□ 0.68
SMTN-222ENST00000612341 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
SMTN-222ENST00000612341 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
SMTN-222ENST00000612341 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
SMTN-222ENST00000612341 CFTRP13569 1480 aa19.25■□□□□ 0.67
SMTN-222ENST00000612341 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
SMTN-222ENST00000612341 PRXQ9BXM0 1461 aa19.24■□□□□ 0.67
SMTN-222ENST00000612341 ZNF316A6NFI3 1004 aaPredicted RBP19.21■□□□□ 0.67
SMTN-222ENST00000612341 ITGAEP38570 1179 aa19.18■□□□□ 0.66
SMTN-222ENST00000612341 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
SMTN-222ENST00000612341 ARAP1Q96P48 1450 aa19.17■□□□□ 0.66
SMTN-222ENST00000612341 CUX2O14529 1486 aa19.15■□□□□ 0.66
SMTN-222ENST00000612341 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.66
SMTN-222ENST00000612341 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
SMTN-222ENST00000612341 YTHDC1Q96MU7 727 aaKnown RBP19.12■□□□□ 0.65
SMTN-222ENST00000612341 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
SMTN-222ENST00000612341 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
SMTN-222ENST00000612341 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
SMTN-222ENST00000612341 IGF1RP08069 1367 aa19.08■□□□□ 0.64
SMTN-222ENST00000612341 ARHGAP35Q9NRY4 1499 aa19.04■□□□□ 0.64
SMTN-222ENST00000612341 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
SMTN-222ENST00000612341 CARMIL1Q5VZK9 1371 aa19.03■□□□□ 0.64
SMTN-222ENST00000612341 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
SMTN-222ENST00000612341 PRKCSHP14314 528 aaPredicted RBP19.02■□□□□ 0.64
SMTN-222ENST00000612341 MIER1Q8N108 512 aa19■□□□□ 0.63
SMTN-222ENST00000612341 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
SMTN-222ENST00000612341 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
SMTN-222ENST00000612341 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
SMTN-222ENST00000612341 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
SMTN-222ENST00000612341 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
SMTN-222ENST00000612341 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
SMTN-222ENST00000612341 NESP48681 1621 aa18.93■□□□□ 0.62
SMTN-222ENST00000612341 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
SMTN-222ENST00000612341 FAM50AQ14320 339 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms