RNA–Protein interactions for RNA: ENST00000557686.1

KLC1-226, Transcript of kinesin light chain 1, humanhuman

TSL 3

Gene KLC1, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-226ENST00000557686 NISCHQ9Y2I1 1504 aa52.84■■■■■ 6.05
KLC1-226ENST00000557686 CCDC180Q9P1Z9 1646 aa47.03■■■■■ 5.12
KLC1-226ENST00000557686 ABCC9O60706 1549 aa45.99■■■■■ 4.95
KLC1-226ENST00000557686 RB1CC1Q8TDY2 1594 aa44.32■■■■■ 4.69
KLC1-226ENST00000557686 NACADO15069 1562 aa44.3■■■■■ 4.68
KLC1-226ENST00000557686 MYO15BQ96JP2 1530 aa44.11■■■■■ 4.65
KLC1-226ENST00000557686 DCAF8L2P0C7V8 631 aa44.08■■■■■ 4.65
KLC1-226ENST00000557686 ZCCHC6Q5VYS8 1495 aaKnown RBP43.96■■■■■ 4.63
KLC1-226ENST00000557686 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
KLC1-226ENST00000557686 UNC13AQ9UPW8 1703 aa43.18■■■■■ 4.5
KLC1-226ENST00000557686 PABPN1Q86U42 306 aaKnown RBP eCLIP42.97■■■■■ 4.47
KLC1-226ENST00000557686 BICRAQ9NZM4 1560 aa42.93■■■■■ 4.46
KLC1-226ENST00000557686 SCRIBQ14160 1630 aa42.73■■■■■ 4.43
KLC1-226ENST00000557686 SHROOM4Q9ULL8 1493 aa42.67■■■■■ 4.42
KLC1-226ENST00000557686 DNAJC5BQ9UF47 199 aa42.37■■■■■ 4.37
KLC1-226ENST00000557686 EIF4G1Q04637 1599 aaKnown RBP41.81■■■■■ 4.28
KLC1-226ENST00000557686 CC2D2AQ9P2K1 1620 aa41.64■■■■■ 4.26
KLC1-226ENST00000557686 CECR2Q9BXF3 1484 aa41.41■■■■■ 4.22
KLC1-226ENST00000557686 BAZ1AQ9NRL2 1556 aaPredicted RBP40.97■■■■■ 4.15
KLC1-226ENST00000557686 SMARCA4P51532 1647 aa40.96■■■■■ 4.15
KLC1-226ENST00000557686 NCAPD3P42695 1498 aa40.9■■■■■ 4.14
KLC1-226ENST00000557686 ATAD2BQ9ULI0 1458 aa40.83■■■■■ 4.13
KLC1-226ENST00000557686 SMARCA2P51531 1590 aa40.81■■■■■ 4.12
KLC1-226ENST00000557686 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
KLC1-226ENST00000557686 MROH2BQ7Z745 1585 aa40.65■■■■■ 4.1
KLC1-226ENST00000557686 HMGXB3Q12766 1538 aa40.64■■■■■ 4.1
KLC1-226ENST00000557686 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
KLC1-226ENST00000557686 RSF1Q96T23 1441 aaPredicted RBP40.2■■■■■ 4.03
KLC1-226ENST00000557686 WIZO95785 1651 aa40.15■■■■■ 4.02
KLC1-226ENST00000557686 TOP2AP11388 1531 aaKnown RBP39.81■■■■□ 3.96
KLC1-226ENST00000557686 LAMC3Q9Y6N6 1575 aa39.79■■■■□ 3.96
KLC1-226ENST00000557686 NESP48681 1621 aa39.76■■■■□ 3.95
KLC1-226ENST00000557686 ERCC6Q03468 1493 aa39.69■■■■□ 3.94
KLC1-226ENST00000557686 CADPSQ9ULU8 1353 aa39.68■■■■□ 3.94
KLC1-226ENST00000557686 PDS5BQ9NTI5 1447 aa39.57■■■■□ 3.92
KLC1-226ENST00000557686 CUX2O14529 1486 aa39.44■■■■□ 3.9
KLC1-226ENST00000557686 CFTRP13569 1480 aa39.41■■■■□ 3.9
KLC1-226ENST00000557686 CCDC88BA6NC98 1476 aa39.35■■■■□ 3.89
KLC1-226ENST00000557686 KIF21AQ7Z4S6 1674 aa39.26■■■■□ 3.88
KLC1-226ENST00000557686 THOC2Q8NI27 1593 aaKnown RBP39.21■■■■□ 3.87
KLC1-226ENST00000557686 FANCD2Q9BXW9 1451 aa39.15■■■■□ 3.86
KLC1-226ENST00000557686 CEP164Q9UPV0 1460 aa39.11■■■■□ 3.85
KLC1-226ENST00000557686 MRC2Q9UBG0 1479 aa39.08■■■■□ 3.85
KLC1-226ENST00000557686 PRDM2Q13029 1718 aa39■■■■□ 3.83
KLC1-226ENST00000557686 SUPT5HO00267 1087 aaKnown RBP38.99■■■■□ 3.83
KLC1-226ENST00000557686 WDR62O43379 1518 aa38.96■■■■□ 3.83
KLC1-226ENST00000557686 URB2Q14146 1524 aaKnown RBP38.73■■■■□ 3.79
KLC1-226ENST00000557686 ABCC8Q09428 1581 aa38.65■■■■□ 3.78
KLC1-226ENST00000557686 TOPBP1Q92547 1522 aa38.5■■■■□ 3.75
KLC1-226ENST00000557686 DNMBPQ6XZF7 1577 aa38.45■■■■□ 3.75
KLC1-226ENST00000557686 DNAJC5Q9H3Z4 198 aa38.38■■■■□ 3.73
KLC1-226ENST00000557686 IFT140Q96RY7 1462 aa38.35■■■■□ 3.73
KLC1-226ENST00000557686 POLA1P09884 1462 aaPredicted RBP38.16■■■■□ 3.7
KLC1-226ENST00000557686 CUX1P39880 1505 aa38.13■■■■□ 3.69
KLC1-226ENST00000557686 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
KLC1-226ENST00000557686 ZNF608Q9ULD9 1512 aaPredicted RBP38.07■■■■□ 3.68
KLC1-226ENST00000557686 SOGA1O94964 1423 aa38.05■■■■□ 3.68
KLC1-226ENST00000557686 FGD5Q6ZNL6 1462 aa38.03■■■■□ 3.68
KLC1-226ENST00000557686 RAD54L2Q9Y4B4 1467 aa37.94■■■■□ 3.66
KLC1-226ENST00000557686 WDR97A6NE52 1622 aa37.9■■■■□ 3.66
KLC1-226ENST00000557686 EIF4G3O43432 1585 aaKnown RBP37.9■■■■□ 3.66
KLC1-226ENST00000557686 WRNQ14191 1432 aaPredicted RBP eCLIP37.9■■■■□ 3.662e-10■■■■■ 91.9
KLC1-226ENST00000557686 AQRO60306 1485 aaKnown RBP eCLIP37.87■■■■□ 3.65
KLC1-226ENST00000557686 TOP2BQ02880 1626 aa37.83■■■■□ 3.65
KLC1-226ENST00000557686 OSCARQ8IYS5 282 aa37.82■■■■□ 3.64
KLC1-226ENST00000557686 BIVM-ERCC5R4GMW8 1640 aa37.8■■■■□ 3.64
KLC1-226ENST00000557686 TDRD9Q8NDG6 1382 aaKnown RBP37.79■■■■□ 3.64
KLC1-226ENST00000557686 ABCA10Q8WWZ4 1543 aa37.74■■■■□ 3.63
KLC1-226ENST00000557686 SYNJ1O43426 1573 aa37.72■■■■□ 3.63
KLC1-226ENST00000557686 GRIN2BQ13224 1484 aa37.63■■■■□ 3.61
KLC1-226ENST00000557686 GAPVD1Q14C86 1478 aa37.59■■■■□ 3.61
KLC1-226ENST00000557686 MAGI1Q96QZ7 1491 aaPredicted RBP37.56■■■■□ 3.6
KLC1-226ENST00000557686 ABCA5Q8WWZ7 1642 aa37.53■■■■□ 3.6
KLC1-226ENST00000557686 SNAPC4Q5SXM2 1469 aa37.5■■■■□ 3.59
KLC1-226ENST00000557686 FBLN2P98095 1184 aa37.42■■■■□ 3.58
KLC1-226ENST00000557686 PBRM1Q86U86 1689 aa37.41■■■■□ 3.58
KLC1-226ENST00000557686 CHD1O14646 1710 aa37.41■■■■□ 3.58
KLC1-226ENST00000557686 CHMP7Q8WUX9 453 aaPredicted RBP37.4■■■■□ 3.58
KLC1-226ENST00000557686 SYNJ2O15056 1496 aa37.39■■■■□ 3.58
KLC1-226ENST00000557686 ERICH3Q5RHP9 1530 aa37.31■■■■□ 3.56
KLC1-226ENST00000557686 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
KLC1-226ENST00000557686 KIF27Q86VH2 1401 aa37.16■■■■□ 3.54
KLC1-226ENST00000557686 ADAMTS12P58397 1594 aa37.15■■■■□ 3.54
KLC1-226ENST00000557686 CLASP1Q7Z460 1538 aa37.1■■■■□ 3.53
KLC1-226ENST00000557686 GRIN2AQ12879 1464 aa37.1■■■■□ 3.53
KLC1-226ENST00000557686 ARHGEF11O15085 1522 aa37.07■■■■□ 3.53
KLC1-226ENST00000557686 RIMBP3CA6NJZ7 1639 aa37.05■■■■□ 3.52
KLC1-226ENST00000557686 RIMBP3BA6NNM3 1639 aa37.05■■■■□ 3.52
KLC1-226ENST00000557686 RIMBP3Q9UFD9 1639 aa37.05■■■■□ 3.52
KLC1-226ENST00000557686 IGF1RP08069 1367 aa37.04■■■■□ 3.52
KLC1-226ENST00000557686 NUP160Q12769 1436 aa36.99■■■■□ 3.51
KLC1-226ENST00000557686 TRIM41Q8WV44 630 aa36.98■■■■□ 3.51
KLC1-226ENST00000557686 CUL7Q14999 1698 aa36.9■■■■□ 3.5
KLC1-226ENST00000557686 CEP170Q5SW79 1584 aa36.87■■■■□ 3.49
KLC1-226ENST00000557686 CARMIL1Q5VZK9 1371 aa36.79■■■■□ 3.48
KLC1-226ENST00000557686 CYB5RLQ6IPT4 315 aa36.76■■■■□ 3.48
KLC1-226ENST00000557686 ARAP1Q96P48 1450 aa36.75■■■■□ 3.47
KLC1-226ENST00000557686 SHROOM2Q13796 1616 aa36.69■■■■□ 3.46
KLC1-226ENST00000557686 JPH4Q96JJ6 628 aa36.65■■■■□ 3.46
KLC1-226ENST00000557686 RUSC2Q8N2Y8 1516 aa36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms