RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
SMTN-218ENST00000489337 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
SMTN-218ENST00000489337 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.96
SMTN-218ENST00000489337 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
SMTN-218ENST00000489337 ABCC9O60706 1549 aa20.23■□□□□ 0.83
SMTN-218ENST00000489337 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
SMTN-218ENST00000489337 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
SMTN-218ENST00000489337 HRCP23327 699 aa19.6■□□□□ 0.73
SMTN-218ENST00000489337 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.733e-10■■■■□ 19.6
SMTN-218ENST00000489337 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
SMTN-218ENST00000489337 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
SMTN-218ENST00000489337 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
SMTN-218ENST00000489337 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
SMTN-218ENST00000489337 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
SMTN-218ENST00000489337 PELP1Q8IZL8 1130 aaKnown RBP19.02■□□□□ 0.63
SMTN-218ENST00000489337 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
SMTN-218ENST00000489337 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
SMTN-218ENST00000489337 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
SMTN-218ENST00000489337 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
SMTN-218ENST00000489337 NACADO15069 1562 aa18.88■□□□□ 0.61
SMTN-218ENST00000489337 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
SMTN-218ENST00000489337 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
SMTN-218ENST00000489337 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
SMTN-218ENST00000489337 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
SMTN-218ENST00000489337 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
SMTN-218ENST00000489337 RANGAP1P46060 587 aaPredicted RBP18.58■□□□□ 0.56
SMTN-218ENST00000489337 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
SMTN-218ENST00000489337 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
SMTN-218ENST00000489337 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
SMTN-218ENST00000489337 WIZO95785 1651 aa18.52■□□□□ 0.55
SMTN-218ENST00000489337 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
SMTN-218ENST00000489337 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
SMTN-218ENST00000489337 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
SMTN-218ENST00000489337 MYT1Q01538 1121 aa18.29■□□□□ 0.52
SMTN-218ENST00000489337 BAZ1AQ9NRL2 1556 aaPredicted RBP18.27■□□□□ 0.51
SMTN-218ENST00000489337 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
SMTN-218ENST00000489337 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
SMTN-218ENST00000489337 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
SMTN-218ENST00000489337 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
SMTN-218ENST00000489337 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
SMTN-218ENST00000489337 ACIN1Q9UKV3 1341 aaKnown RBP18.12■□□□□ 0.49
SMTN-218ENST00000489337 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
SMTN-218ENST00000489337 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
SMTN-218ENST00000489337 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
SMTN-218ENST00000489337 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.47
SMTN-218ENST00000489337 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
SMTN-218ENST00000489337 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
SMTN-218ENST00000489337 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
SMTN-218ENST00000489337 SOGA1O94964 1423 aa17.9■□□□□ 0.46
SMTN-218ENST00000489337 SMARCA2P51531 1590 aa17.89■□□□□ 0.46
SMTN-218ENST00000489337 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
SMTN-218ENST00000489337 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
SMTN-218ENST00000489337 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.45
SMTN-218ENST00000489337 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
SMTN-218ENST00000489337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
SMTN-218ENST00000489337 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
SMTN-218ENST00000489337 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
SMTN-218ENST00000489337 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
SMTN-218ENST00000489337 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
SMTN-218ENST00000489337 NESP48681 1621 aa17.7■□□□□ 0.42
SMTN-218ENST00000489337 YTHDC1Q96MU7 727 aaKnown RBP17.61■□□□□ 0.41
SMTN-218ENST00000489337 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
SMTN-218ENST00000489337 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
SMTN-218ENST00000489337 FBLN2P98095 1184 aa17.58■□□□□ 0.4
SMTN-218ENST00000489337 APLP2Q06481 763 aa17.57■□□□□ 0.4
SMTN-218ENST00000489337 ITGAEP38570 1179 aa17.54■□□□□ 0.4
SMTN-218ENST00000489337 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
SMTN-218ENST00000489337 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
SMTN-218ENST00000489337 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
SMTN-218ENST00000489337 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
SMTN-218ENST00000489337 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
SMTN-218ENST00000489337 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
SMTN-218ENST00000489337 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
SMTN-218ENST00000489337 CUX2O14529 1486 aa17.41■□□□□ 0.38
SMTN-218ENST00000489337 RAD54L2Q9Y4B4 1467 aa17.41■□□□□ 0.38
SMTN-218ENST00000489337 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.37
SMTN-218ENST00000489337 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
SMTN-218ENST00000489337 CFTRP13569 1480 aa17.36■□□□□ 0.37
SMTN-218ENST00000489337 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
SMTN-218ENST00000489337 MIER1Q8N108 512 aa17.34■□□□□ 0.37
SMTN-218ENST00000489337 CUX1P39880 1505 aa17.34■□□□□ 0.37
SMTN-218ENST00000489337 CLIP1P30622 1438 aa17.29■□□□□ 0.36
SMTN-218ENST00000489337 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
SMTN-218ENST00000489337 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
SMTN-218ENST00000489337 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
SMTN-218ENST00000489337 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
SMTN-218ENST00000489337 TNIKQ9UKE5 1360 aa17.22■□□□□ 0.35
SMTN-218ENST00000489337 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.34
SMTN-218ENST00000489337 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
SMTN-218ENST00000489337 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
SMTN-218ENST00000489337 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
SMTN-218ENST00000489337 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.346e-8■■■■■ 47.6
SMTN-218ENST00000489337 IGF1RP08069 1367 aa17.15■□□□□ 0.34
SMTN-218ENST00000489337 EEA1Q15075 1411 aa17.14■□□□□ 0.33
SMTN-218ENST00000489337 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
SMTN-218ENST00000489337 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
SMTN-218ENST00000489337 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
SMTN-218ENST00000489337 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
SMTN-218ENST00000489337 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
SMTN-218ENST00000489337 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms