RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
FDPS-207ENST00000468479 ABCC9O60706 1549 aa27.94■■■□□ 2.06
FDPS-207ENST00000468479 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
FDPS-207ENST00000468479 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
FDPS-207ENST00000468479 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
FDPS-207ENST00000468479 NACADO15069 1562 aa26.32■■□□□ 1.8
FDPS-207ENST00000468479 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
FDPS-207ENST00000468479 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
FDPS-207ENST00000468479 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
FDPS-207ENST00000468479 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
FDPS-207ENST00000468479 DCAF1Q9Y4B6 1507 aa25.84■■□□□ 1.73
FDPS-207ENST00000468479 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.724e-8■□□□□ 8.9
FDPS-207ENST00000468479 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
FDPS-207ENST00000468479 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
FDPS-207ENST00000468479 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
FDPS-207ENST00000468479 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
FDPS-207ENST00000468479 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
FDPS-207ENST00000468479 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
FDPS-207ENST00000468479 DNAJC5Q9H3Z4 198 aa24.82■■□□□ 1.56
FDPS-207ENST00000468479 CUX2O14529 1486 aa24.31■■□□□ 1.48
FDPS-207ENST00000468479 NCAPD3P42695 1498 aa24.3■■□□□ 1.48
FDPS-207ENST00000468479 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
FDPS-207ENST00000468479 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
FDPS-207ENST00000468479 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
FDPS-207ENST00000468479 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
FDPS-207ENST00000468479 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
FDPS-207ENST00000468479 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
FDPS-207ENST00000468479 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
FDPS-207ENST00000468479 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
FDPS-207ENST00000468479 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
FDPS-207ENST00000468479 NESP48681 1621 aa23.83■■□□□ 1.41
FDPS-207ENST00000468479 THOC2Q8NI27 1593 aaKnown RBP23.81■■□□□ 1.4
FDPS-207ENST00000468479 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
FDPS-207ENST00000468479 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
FDPS-207ENST00000468479 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
FDPS-207ENST00000468479 WIZO95785 1651 aa23.65■■□□□ 1.38
FDPS-207ENST00000468479 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
FDPS-207ENST00000468479 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
FDPS-207ENST00000468479 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
FDPS-207ENST00000468479 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
FDPS-207ENST00000468479 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
FDPS-207ENST00000468479 CFTRP13569 1480 aa23.36■■□□□ 1.33
FDPS-207ENST00000468479 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
FDPS-207ENST00000468479 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
FDPS-207ENST00000468479 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
FDPS-207ENST00000468479 WDR62O43379 1518 aa23.28■■□□□ 1.32
FDPS-207ENST00000468479 CCDC88BA6NC98 1476 aa23.21■■□□□ 1.31
FDPS-207ENST00000468479 URB2Q14146 1524 aaKnown RBP23.02■■□□□ 1.28
FDPS-207ENST00000468479 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
FDPS-207ENST00000468479 OSCARQ8IYS5 282 aa22.98■■□□□ 1.27
FDPS-207ENST00000468479 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
FDPS-207ENST00000468479 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
FDPS-207ENST00000468479 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
FDPS-207ENST00000468479 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
FDPS-207ENST00000468479 IFT140Q96RY7 1462 aa22.86■■□□□ 1.25
FDPS-207ENST00000468479 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
FDPS-207ENST00000468479 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
FDPS-207ENST00000468479 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
FDPS-207ENST00000468479 ZNF608Q9ULD9 1512 aaPredicted RBP22.67■■□□□ 1.22
FDPS-207ENST00000468479 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
FDPS-207ENST00000468479 CHD1O14646 1710 aa22.63■■□□□ 1.21
FDPS-207ENST00000468479 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
FDPS-207ENST00000468479 SOGA1O94964 1423 aa22.59■■□□□ 1.21
FDPS-207ENST00000468479 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
FDPS-207ENST00000468479 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
FDPS-207ENST00000468479 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.23e-7■■■■□ 24.2
FDPS-207ENST00000468479 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
FDPS-207ENST00000468479 CUX1P39880 1505 aa22.52■■□□□ 1.2
FDPS-207ENST00000468479 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
FDPS-207ENST00000468479 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
FDPS-207ENST00000468479 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
FDPS-207ENST00000468479 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
FDPS-207ENST00000468479 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
FDPS-207ENST00000468479 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
FDPS-207ENST00000468479 FBLN2P98095 1184 aa22.43■■□□□ 1.18
FDPS-207ENST00000468479 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
FDPS-207ENST00000468479 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
FDPS-207ENST00000468479 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
FDPS-207ENST00000468479 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
FDPS-207ENST00000468479 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
FDPS-207ENST00000468479 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
FDPS-207ENST00000468479 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
FDPS-207ENST00000468479 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
FDPS-207ENST00000468479 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
FDPS-207ENST00000468479 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
FDPS-207ENST00000468479 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
FDPS-207ENST00000468479 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
FDPS-207ENST00000468479 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
FDPS-207ENST00000468479 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
FDPS-207ENST00000468479 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
FDPS-207ENST00000468479 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
FDPS-207ENST00000468479 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
FDPS-207ENST00000468479 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
FDPS-207ENST00000468479 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
FDPS-207ENST00000468479 NUP160Q12769 1436 aa21.97■■□□□ 1.11
FDPS-207ENST00000468479 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
FDPS-207ENST00000468479 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
FDPS-207ENST00000468479 IGF1RP08069 1367 aa21.85■■□□□ 1.09
FDPS-207ENST00000468479 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
FDPS-207ENST00000468479 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms