RNA–Protein interactions for RNA: ENST00000472911.1

SMTN-215, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-215ENST00000472911 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
SMTN-215ENST00000472911 ABCC9O60706 1549 aa26.39■■□□□ 1.82
SMTN-215ENST00000472911 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
SMTN-215ENST00000472911 DNAJC5BQ9UF47 199 aa25.36■■□□□ 1.65
SMTN-215ENST00000472911 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
SMTN-215ENST00000472911 NACADO15069 1562 aa24.5■■□□□ 1.51
SMTN-215ENST00000472911 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
SMTN-215ENST00000472911 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
SMTN-215ENST00000472911 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
SMTN-215ENST00000472911 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
SMTN-215ENST00000472911 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
SMTN-215ENST00000472911 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
SMTN-215ENST00000472911 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
SMTN-215ENST00000472911 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
SMTN-215ENST00000472911 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
SMTN-215ENST00000472911 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
SMTN-215ENST00000472911 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
SMTN-215ENST00000472911 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
SMTN-215ENST00000472911 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
SMTN-215ENST00000472911 CUX2O14529 1486 aa22.98■■□□□ 1.27
SMTN-215ENST00000472911 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
SMTN-215ENST00000472911 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
SMTN-215ENST00000472911 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
SMTN-215ENST00000472911 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
SMTN-215ENST00000472911 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
SMTN-215ENST00000472911 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
SMTN-215ENST00000472911 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
SMTN-215ENST00000472911 NESP48681 1621 aa22.52■■□□□ 1.2
SMTN-215ENST00000472911 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
SMTN-215ENST00000472911 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
SMTN-215ENST00000472911 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
SMTN-215ENST00000472911 WIZO95785 1651 aa22.39■■□□□ 1.18
SMTN-215ENST00000472911 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
SMTN-215ENST00000472911 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
SMTN-215ENST00000472911 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
SMTN-215ENST00000472911 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
SMTN-215ENST00000472911 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
SMTN-215ENST00000472911 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
SMTN-215ENST00000472911 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
SMTN-215ENST00000472911 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
SMTN-215ENST00000472911 WDR62O43379 1518 aa21.94■■□□□ 1.1
SMTN-215ENST00000472911 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
SMTN-215ENST00000472911 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
SMTN-215ENST00000472911 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
SMTN-215ENST00000472911 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
SMTN-215ENST00000472911 CFTRP13569 1480 aa21.76■■□□□ 1.07
SMTN-215ENST00000472911 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
SMTN-215ENST00000472911 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
SMTN-215ENST00000472911 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
SMTN-215ENST00000472911 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
SMTN-215ENST00000472911 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
SMTN-215ENST00000472911 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
SMTN-215ENST00000472911 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
SMTN-215ENST00000472911 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
SMTN-215ENST00000472911 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
SMTN-215ENST00000472911 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
SMTN-215ENST00000472911 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
SMTN-215ENST00000472911 TRHP20396 242 aaPredicted RBP21.31■■□□□ 1
SMTN-215ENST00000472911 TOPBP1Q92547 1522 aa21.3■■□□□ 1
SMTN-215ENST00000472911 DNMBPQ6XZF7 1577 aa21.3■■□□□ 1
SMTN-215ENST00000472911 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
SMTN-215ENST00000472911 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
SMTN-215ENST00000472911 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
SMTN-215ENST00000472911 CHD1O14646 1710 aa21.21■□□□□ 0.99
SMTN-215ENST00000472911 CUX1P39880 1505 aa21.19■□□□□ 0.98
SMTN-215ENST00000472911 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
SMTN-215ENST00000472911 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.971e-7■■■■■ 90.2
SMTN-215ENST00000472911 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
SMTN-215ENST00000472911 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
SMTN-215ENST00000472911 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
SMTN-215ENST00000472911 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
SMTN-215ENST00000472911 FBLN2P98095 1184 aa21.07■□□□□ 0.96
SMTN-215ENST00000472911 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
SMTN-215ENST00000472911 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
SMTN-215ENST00000472911 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
SMTN-215ENST00000472911 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
SMTN-215ENST00000472911 SOGA1O94964 1423 aa21■□□□□ 0.95
SMTN-215ENST00000472911 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
SMTN-215ENST00000472911 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
SMTN-215ENST00000472911 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
SMTN-215ENST00000472911 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
SMTN-215ENST00000472911 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
SMTN-215ENST00000472911 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
SMTN-215ENST00000472911 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
SMTN-215ENST00000472911 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
SMTN-215ENST00000472911 GAPVD1Q14C86 1478 aa20.78■□□□□ 0.92
SMTN-215ENST00000472911 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.92
SMTN-215ENST00000472911 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
SMTN-215ENST00000472911 SYNJ2O15056 1496 aa20.72■□□□□ 0.91
SMTN-215ENST00000472911 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
SMTN-215ENST00000472911 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
SMTN-215ENST00000472911 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
SMTN-215ENST00000472911 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
SMTN-215ENST00000472911 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
SMTN-215ENST00000472911 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
SMTN-215ENST00000472911 IGF1RP08069 1367 aa20.5■□□□□ 0.87
SMTN-215ENST00000472911 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
SMTN-215ENST00000472911 CUL7Q14999 1698 aa20.5■□□□□ 0.87
SMTN-215ENST00000472911 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
SMTN-215ENST00000472911 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms