RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
SMTN-201ENST00000333137 PELP1Q8IZL8 1130 aaKnown RBP23.7■■□□□ 1.38
SMTN-201ENST00000333137 MYT1Q01538 1121 aa23.13■■□□□ 1.29
SMTN-201ENST00000333137 HRCP23327 699 aa22.64■■□□□ 1.21
SMTN-201ENST00000333137 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
SMTN-201ENST00000333137 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
SMTN-201ENST00000333137 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
SMTN-201ENST00000333137 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
SMTN-201ENST00000333137 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
SMTN-201ENST00000333137 PRKCSHP14314 528 aaPredicted RBP21.76■■□□□ 1.07
SMTN-201ENST00000333137 BCL11AQ9H165 835 aa21.65■■□□□ 1.06
SMTN-201ENST00000333137 ABCC9O60706 1549 aa21.44■■□□□ 1.02
SMTN-201ENST00000333137 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
SMTN-201ENST00000333137 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
SMTN-201ENST00000333137 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
SMTN-201ENST00000333137 GTF3C3Q9Y5Q9 886 aa21.29■■□□□ 1
SMTN-201ENST00000333137 CENPBP07199 599 aaPredicted RBP21.28■■□□□ 1
SMTN-201ENST00000333137 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
SMTN-201ENST00000333137 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
SMTN-201ENST00000333137 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
SMTN-201ENST00000333137 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
SMTN-201ENST00000333137 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
SMTN-201ENST00000333137 ZEB1P37275 1124 aaPredicted RBP20.86■□□□□ 0.93
SMTN-201ENST00000333137 APLP2Q06481 763 aa20.83■□□□□ 0.93
SMTN-201ENST00000333137 ANP32EQ9BTT0 268 aa20.75■□□□□ 0.91
SMTN-201ENST00000333137 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
SMTN-201ENST00000333137 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
SMTN-201ENST00000333137 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
SMTN-201ENST00000333137 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.883e-10■■■■□ 19.6
SMTN-201ENST00000333137 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
SMTN-201ENST00000333137 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
SMTN-201ENST00000333137 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
SMTN-201ENST00000333137 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
SMTN-201ENST00000333137 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
SMTN-201ENST00000333137 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
SMTN-201ENST00000333137 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
SMTN-201ENST00000333137 NACADO15069 1562 aa20.2■□□□□ 0.82
SMTN-201ENST00000333137 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
SMTN-201ENST00000333137 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
SMTN-201ENST00000333137 TSHZ2Q9NRE2 1034 aa20.07■□□□□ 0.8
SMTN-201ENST00000333137 EIF5BO60841 1220 aaKnown RBP20■□□□□ 0.79
SMTN-201ENST00000333137 CCDC136Q96JN2 1154 aa19.94■□□□□ 0.78
SMTN-201ENST00000333137 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
SMTN-201ENST00000333137 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
SMTN-201ENST00000333137 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
SMTN-201ENST00000333137 SUPT16HQ9Y5B9 1047 aaKnown RBP19.82■□□□□ 0.76
SMTN-201ENST00000333137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
SMTN-201ENST00000333137 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
SMTN-201ENST00000333137 UBE2Q2Q8WVN8 375 aa19.78■□□□□ 0.76
SMTN-201ENST00000333137 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
SMTN-201ENST00000333137 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.66■□□□□ 0.74
SMTN-201ENST00000333137 MIER1Q8N108 512 aa19.64■□□□□ 0.74
SMTN-201ENST00000333137 UNC13AQ9UPW8 1703 aa19.63■□□□□ 0.73
SMTN-201ENST00000333137 BCANQ96GW7 911 aa19.62■□□□□ 0.73
SMTN-201ENST00000333137 DEKP35659 375 aaKnown RBP19.59■□□□□ 0.73
SMTN-201ENST00000333137 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
SMTN-201ENST00000333137 DAXXQ9UER7 740 aaPredicted RBP19.55■□□□□ 0.72
SMTN-201ENST00000333137 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
SMTN-201ENST00000333137 PKNOX2Q96KN3 472 aa19.54■□□□□ 0.72
SMTN-201ENST00000333137 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
SMTN-201ENST00000333137 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
SMTN-201ENST00000333137 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.72
SMTN-201ENST00000333137 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
SMTN-201ENST00000333137 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
SMTN-201ENST00000333137 RTN4Q9NQC3 1192 aaKnown RBP19.47■□□□□ 0.71
SMTN-201ENST00000333137 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
SMTN-201ENST00000333137 MSH5O43196 834 aa19.4■□□□□ 0.7
SMTN-201ENST00000333137 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
SMTN-201ENST00000333137 ERICH6BQ5W0A0 696 aa19.36■□□□□ 0.69
SMTN-201ENST00000333137 WIZO95785 1651 aa19.31■□□□□ 0.68
SMTN-201ENST00000333137 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.68
SMTN-201ENST00000333137 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.67
SMTN-201ENST00000333137 IL27Q8NEV9 243 aa19.23■□□□□ 0.67
SMTN-201ENST00000333137 FKBP8Q14318 412 aa19.22■□□□□ 0.67
SMTN-201ENST00000333137 NBR1Q14596 966 aa19.22■□□□□ 0.67
SMTN-201ENST00000333137 ITGAEP38570 1179 aa19.21■□□□□ 0.67
SMTN-201ENST00000333137 SMARCA4P51532 1647 aa19.2■□□□□ 0.66
SMTN-201ENST00000333137 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
SMTN-201ENST00000333137 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
SMTN-201ENST00000333137 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
SMTN-201ENST00000333137 NEFLP07196 543 aa19.08■□□□□ 0.64
SMTN-201ENST00000333137 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
SMTN-201ENST00000333137 FANCIQ9NVI1 1328 aa18.99■□□□□ 0.63
SMTN-201ENST00000333137 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
SMTN-201ENST00000333137 TIMELESSQ9UNS1 1208 aa18.96■□□□□ 0.63
SMTN-201ENST00000333137 CCDC88BA6NC98 1476 aa18.95■□□□□ 0.62
SMTN-201ENST00000333137 A0A0U1RQG5 324 aaPredicted RBP18.91■□□□□ 0.62
SMTN-201ENST00000333137 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
SMTN-201ENST00000333137 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.62
SMTN-201ENST00000333137 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
SMTN-201ENST00000333137 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
SMTN-201ENST00000333137 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
SMTN-201ENST00000333137 ZMYND15Q9H091 742 aa18.85■□□□□ 0.61
SMTN-201ENST00000333137 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
SMTN-201ENST00000333137 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.6
SMTN-201ENST00000333137 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
SMTN-201ENST00000333137 NESP48681 1621 aa18.69■□□□□ 0.58
SMTN-201ENST00000333137 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
SMTN-201ENST00000333137 PDE4CQ08493 712 aa18.68■□□□□ 0.58
SMTN-201ENST00000333137 KCNH8Q96L42 1107 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms