RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-204ENST00000461507 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
FDPS-204ENST00000461507 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
FDPS-204ENST00000461507 ABCC9O60706 1549 aa28.13■■■□□ 2.09
FDPS-204ENST00000461507 RB1CC1Q8TDY2 1594 aa26.95■■□□□ 1.9
FDPS-204ENST00000461507 NACADO15069 1562 aa26.83■■□□□ 1.89
FDPS-204ENST00000461507 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
FDPS-204ENST00000461507 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
FDPS-204ENST00000461507 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
FDPS-204ENST00000461507 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
FDPS-204ENST00000461507 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
FDPS-204ENST00000461507 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
FDPS-204ENST00000461507 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
FDPS-204ENST00000461507 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
FDPS-204ENST00000461507 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
FDPS-204ENST00000461507 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
FDPS-204ENST00000461507 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
FDPS-204ENST00000461507 CC2D2AQ9P2K1 1620 aa25.49■■□□□ 1.67
FDPS-204ENST00000461507 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
FDPS-204ENST00000461507 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
FDPS-204ENST00000461507 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
FDPS-204ENST00000461507 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
FDPS-204ENST00000461507 SMARCA2P51531 1590 aa24.64■■□□□ 1.54
FDPS-204ENST00000461507 HMGXB3Q12766 1538 aa24.63■■□□□ 1.53
FDPS-204ENST00000461507 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
FDPS-204ENST00000461507 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
FDPS-204ENST00000461507 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
FDPS-204ENST00000461507 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
FDPS-204ENST00000461507 CUX2O14529 1486 aa24.27■■□□□ 1.48
FDPS-204ENST00000461507 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
FDPS-204ENST00000461507 NESP48681 1621 aa24.22■■□□□ 1.47
FDPS-204ENST00000461507 LAMC3Q9Y6N6 1575 aa24.18■■□□□ 1.46
FDPS-204ENST00000461507 WIZO95785 1651 aa24.11■■□□□ 1.45
FDPS-204ENST00000461507 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
FDPS-204ENST00000461507 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
FDPS-204ENST00000461507 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
FDPS-204ENST00000461507 DNAJC5Q9H3Z4 198 aa23.95■■□□□ 1.42
FDPS-204ENST00000461507 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
FDPS-204ENST00000461507 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
FDPS-204ENST00000461507 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
FDPS-204ENST00000461507 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
FDPS-204ENST00000461507 WDR62O43379 1518 aa23.77■■□□□ 1.4
FDPS-204ENST00000461507 CFTRP13569 1480 aa23.75■■□□□ 1.39
FDPS-204ENST00000461507 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
FDPS-204ENST00000461507 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
FDPS-204ENST00000461507 PRDM2Q13029 1718 aa23.64■■□□□ 1.37
FDPS-204ENST00000461507 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
FDPS-204ENST00000461507 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
FDPS-204ENST00000461507 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
FDPS-204ENST00000461507 ABCC8Q09428 1581 aa23.24■■□□□ 1.31
FDPS-204ENST00000461507 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
FDPS-204ENST00000461507 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
FDPS-204ENST00000461507 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
FDPS-204ENST00000461507 TARBP1Q13395 1621 aaKnown RBP23.1■■□□□ 1.29
FDPS-204ENST00000461507 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
FDPS-204ENST00000461507 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
FDPS-204ENST00000461507 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
FDPS-204ENST00000461507 WDR97A6NE52 1622 aa22.95■■□□□ 1.26
FDPS-204ENST00000461507 CUX1P39880 1505 aa22.93■■□□□ 1.26
FDPS-204ENST00000461507 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.267e-9■■■■□ 26.2
FDPS-204ENST00000461507 FGD5Q6ZNL6 1462 aa22.91■■□□□ 1.26
FDPS-204ENST00000461507 CHD1O14646 1710 aa22.89■■□□□ 1.26
FDPS-204ENST00000461507 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
FDPS-204ENST00000461507 SOGA1O94964 1423 aa22.86■■□□□ 1.25
FDPS-204ENST00000461507 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
FDPS-204ENST00000461507 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
FDPS-204ENST00000461507 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
FDPS-204ENST00000461507 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
FDPS-204ENST00000461507 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
FDPS-204ENST00000461507 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
FDPS-204ENST00000461507 TDRD9Q8NDG6 1382 aaKnown RBP22.77■■□□□ 1.24
FDPS-204ENST00000461507 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
FDPS-204ENST00000461507 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
FDPS-204ENST00000461507 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
FDPS-204ENST00000461507 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
FDPS-204ENST00000461507 ABCA5Q8WWZ7 1642 aa22.7■■□□□ 1.22
FDPS-204ENST00000461507 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
FDPS-204ENST00000461507 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
FDPS-204ENST00000461507 CLASP1Q7Z460 1538 aa22.66■■□□□ 1.22
FDPS-204ENST00000461507 TOP2BQ02880 1626 aa22.64■■□□□ 1.22
FDPS-204ENST00000461507 SYNJ2O15056 1496 aa22.64■■□□□ 1.21
FDPS-204ENST00000461507 GAPVD1Q14C86 1478 aa22.63■■□□□ 1.21
FDPS-204ENST00000461507 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
FDPS-204ENST00000461507 FBLN2P98095 1184 aa22.59■■□□□ 1.21
FDPS-204ENST00000461507 ARAP1Q96P48 1450 aa22.58■■□□□ 1.2
FDPS-204ENST00000461507 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
FDPS-204ENST00000461507 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
FDPS-204ENST00000461507 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
FDPS-204ENST00000461507 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
FDPS-204ENST00000461507 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
FDPS-204ENST00000461507 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
FDPS-204ENST00000461507 NUP160Q12769 1436 aa22.39■■□□□ 1.17
FDPS-204ENST00000461507 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
FDPS-204ENST00000461507 CEP170Q5SW79 1584 aa22.36■■□□□ 1.17
FDPS-204ENST00000461507 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
FDPS-204ENST00000461507 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
FDPS-204ENST00000461507 RUSC2Q8N2Y8 1516 aa22.19■■□□□ 1.14
FDPS-204ENST00000461507 CUL7Q14999 1698 aa22.15■■□□□ 1.14
FDPS-204ENST00000461507 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
FDPS-204ENST00000461507 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
FDPS-204ENST00000461507 IGF1RP08069 1367 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms