RNA–Protein interactions for RNA: ENST00000491013.5

FDPS-216, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5

Gene FDPS, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-216ENST00000491013 NISCHQ9Y2I1 1504 aa35.99■■■■□ 3.35
FDPS-216ENST00000491013 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
FDPS-216ENST00000491013 ABCC9O60706 1549 aa31.45■■■□□ 2.63
FDPS-216ENST00000491013 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
FDPS-216ENST00000491013 NACADO15069 1562 aa30.19■■■□□ 2.42
FDPS-216ENST00000491013 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
FDPS-216ENST00000491013 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
FDPS-216ENST00000491013 ZCCHC6Q5VYS8 1495 aaKnown RBP29.95■■■□□ 2.39
FDPS-216ENST00000491013 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
FDPS-216ENST00000491013 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
FDPS-216ENST00000491013 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
FDPS-216ENST00000491013 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.292e-8■□□□□ 9.1
FDPS-216ENST00000491013 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
FDPS-216ENST00000491013 SHROOM4Q9ULL8 1493 aa29.02■■■□□ 2.24
FDPS-216ENST00000491013 DNAJC5BQ9UF47 199 aa29■■■□□ 2.23
FDPS-216ENST00000491013 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
FDPS-216ENST00000491013 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
FDPS-216ENST00000491013 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
FDPS-216ENST00000491013 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
FDPS-216ENST00000491013 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
FDPS-216ENST00000491013 NCAPD3P42695 1498 aa27.84■■■□□ 2.05
FDPS-216ENST00000491013 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.05
FDPS-216ENST00000491013 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
FDPS-216ENST00000491013 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
FDPS-216ENST00000491013 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
FDPS-216ENST00000491013 HMGXB3Q12766 1538 aa27.7■■■□□ 2.02
FDPS-216ENST00000491013 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
FDPS-216ENST00000491013 WIZO95785 1651 aa27.45■■□□□ 1.98
FDPS-216ENST00000491013 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
FDPS-216ENST00000491013 NESP48681 1621 aa27.19■■□□□ 1.94
FDPS-216ENST00000491013 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.94
FDPS-216ENST00000491013 TOP2AP11388 1531 aaKnown RBP27.13■■□□□ 1.93
FDPS-216ENST00000491013 ERCC6Q03468 1493 aa27.11■■□□□ 1.93
FDPS-216ENST00000491013 CADPSQ9ULU8 1353 aa27■■□□□ 1.91
FDPS-216ENST00000491013 PDS5BQ9NTI5 1447 aa26.93■■□□□ 1.9
FDPS-216ENST00000491013 KIF21AQ7Z4S6 1674 aa26.93■■□□□ 1.9
FDPS-216ENST00000491013 CUX2O14529 1486 aa26.91■■□□□ 1.9
FDPS-216ENST00000491013 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
FDPS-216ENST00000491013 CFTRP13569 1480 aa26.83■■□□□ 1.89
FDPS-216ENST00000491013 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
FDPS-216ENST00000491013 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
FDPS-216ENST00000491013 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
FDPS-216ENST00000491013 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
FDPS-216ENST00000491013 CEP164Q9UPV0 1460 aa26.67■■□□□ 1.86
FDPS-216ENST00000491013 WDR62O43379 1518 aa26.6■■□□□ 1.85
FDPS-216ENST00000491013 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
FDPS-216ENST00000491013 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
FDPS-216ENST00000491013 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
FDPS-216ENST00000491013 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
FDPS-216ENST00000491013 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
FDPS-216ENST00000491013 DNAJC5Q9H3Z4 198 aa26.22■■□□□ 1.79
FDPS-216ENST00000491013 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
FDPS-216ENST00000491013 POLA1P09884 1462 aaPredicted RBP26.03■■□□□ 1.76
FDPS-216ENST00000491013 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
FDPS-216ENST00000491013 CUX1P39880 1505 aa26.02■■□□□ 1.76
FDPS-216ENST00000491013 ZNF608Q9ULD9 1512 aaPredicted RBP26.02■■□□□ 1.76
FDPS-216ENST00000491013 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
FDPS-216ENST00000491013 EIF4G3O43432 1585 aaKnown RBP25.93■■□□□ 1.74
FDPS-216ENST00000491013 SOGA1O94964 1423 aa25.91■■□□□ 1.74
FDPS-216ENST00000491013 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
FDPS-216ENST00000491013 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.733e-7■■■■□ 25.2
FDPS-216ENST00000491013 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
FDPS-216ENST00000491013 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
FDPS-216ENST00000491013 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
FDPS-216ENST00000491013 TOP2BQ02880 1626 aa25.78■■□□□ 1.72
FDPS-216ENST00000491013 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
FDPS-216ENST00000491013 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
FDPS-216ENST00000491013 OSCARQ8IYS5 282 aa25.75■■□□□ 1.71
FDPS-216ENST00000491013 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.7
FDPS-216ENST00000491013 CHD1O14646 1710 aa25.67■■□□□ 1.7
FDPS-216ENST00000491013 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
FDPS-216ENST00000491013 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
FDPS-216ENST00000491013 PBRM1Q86U86 1689 aa25.63■■□□□ 1.69
FDPS-216ENST00000491013 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
FDPS-216ENST00000491013 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
FDPS-216ENST00000491013 MAGI1Q96QZ7 1491 aaPredicted RBP25.59■■□□□ 1.69
FDPS-216ENST00000491013 FBLN2P98095 1184 aa25.52■■□□□ 1.68
FDPS-216ENST00000491013 SYNJ2O15056 1496 aa25.48■■□□□ 1.67
FDPS-216ENST00000491013 CHMP7Q8WUX9 453 aaPredicted RBP25.45■■□□□ 1.66
FDPS-216ENST00000491013 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
FDPS-216ENST00000491013 RIMBP3CA6NJZ7 1639 aa25.39■■□□□ 1.66
FDPS-216ENST00000491013 RIMBP3BA6NNM3 1639 aa25.39■■□□□ 1.66
FDPS-216ENST00000491013 RIMBP3Q9UFD9 1639 aa25.39■■□□□ 1.66
FDPS-216ENST00000491013 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
FDPS-216ENST00000491013 ARHGEF11O15085 1522 aa25.35■■□□□ 1.65
FDPS-216ENST00000491013 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
FDPS-216ENST00000491013 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
FDPS-216ENST00000491013 GRIN2AQ12879 1464 aa25.3■■□□□ 1.64
FDPS-216ENST00000491013 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
FDPS-216ENST00000491013 KIF27Q86VH2 1401 aa25.26■■□□□ 1.63
FDPS-216ENST00000491013 NUP160Q12769 1436 aa25.2■■□□□ 1.63
FDPS-216ENST00000491013 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
FDPS-216ENST00000491013 IGF1RP08069 1367 aa25.18■■□□□ 1.62
FDPS-216ENST00000491013 CUL7Q14999 1698 aa25.16■■□□□ 1.62
FDPS-216ENST00000491013 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
FDPS-216ENST00000491013 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
FDPS-216ENST00000491013 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
FDPS-216ENST00000491013 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
FDPS-216ENST00000491013 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
FDPS-216ENST00000491013 ERCC6L2Q5T890 1561 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms