RNA–Protein interactions for RNA: ENST00000477057.5

FDPS-211, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-211ENST00000477057 NISCHQ9Y2I1 1504 aa30.44■■■□□ 2.46
FDPS-211ENST00000477057 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
FDPS-211ENST00000477057 ABCC9O60706 1549 aa26.55■■□□□ 1.84
FDPS-211ENST00000477057 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
FDPS-211ENST00000477057 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
FDPS-211ENST00000477057 NACADO15069 1562 aa25.42■■□□□ 1.66
FDPS-211ENST00000477057 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
FDPS-211ENST00000477057 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
FDPS-211ENST00000477057 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
FDPS-211ENST00000477057 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.57
FDPS-211ENST00000477057 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.561e-8■□□□□ 8.8
FDPS-211ENST00000477057 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
FDPS-211ENST00000477057 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.54
FDPS-211ENST00000477057 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
FDPS-211ENST00000477057 DNAJC5BQ9UF47 199 aa24.21■■□□□ 1.47
FDPS-211ENST00000477057 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
FDPS-211ENST00000477057 CC2D2AQ9P2K1 1620 aa23.96■■□□□ 1.43
FDPS-211ENST00000477057 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
FDPS-211ENST00000477057 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
FDPS-211ENST00000477057 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
FDPS-211ENST00000477057 MROH2BQ7Z745 1585 aa23.49■■□□□ 1.35
FDPS-211ENST00000477057 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
FDPS-211ENST00000477057 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
FDPS-211ENST00000477057 NCAPD3P42695 1498 aa23.41■■□□□ 1.34
FDPS-211ENST00000477057 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
FDPS-211ENST00000477057 HMGXB3Q12766 1538 aa23.34■■□□□ 1.33
FDPS-211ENST00000477057 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
FDPS-211ENST00000477057 WIZO95785 1651 aa23.28■■□□□ 1.32
FDPS-211ENST00000477057 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
FDPS-211ENST00000477057 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
FDPS-211ENST00000477057 NESP48681 1621 aa22.95■■□□□ 1.26
FDPS-211ENST00000477057 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
FDPS-211ENST00000477057 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
FDPS-211ENST00000477057 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
FDPS-211ENST00000477057 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
FDPS-211ENST00000477057 PDS5BQ9NTI5 1447 aa22.73■■□□□ 1.23
FDPS-211ENST00000477057 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
FDPS-211ENST00000477057 KIF21AQ7Z4S6 1674 aa22.69■■□□□ 1.22
FDPS-211ENST00000477057 CFTRP13569 1480 aa22.63■■□□□ 1.21
FDPS-211ENST00000477057 FANCD2Q9BXW9 1451 aa22.57■■□□□ 1.2
FDPS-211ENST00000477057 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
FDPS-211ENST00000477057 THOC2Q8NI27 1593 aaKnown RBP22.56■■□□□ 1.2
FDPS-211ENST00000477057 CUX2O14529 1486 aa22.54■■□□□ 1.2
FDPS-211ENST00000477057 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
FDPS-211ENST00000477057 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
FDPS-211ENST00000477057 WDR62O43379 1518 aa22.38■■□□□ 1.17
FDPS-211ENST00000477057 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
FDPS-211ENST00000477057 TOPBP1Q92547 1522 aa22.2■■□□□ 1.14
FDPS-211ENST00000477057 DNMBPQ6XZF7 1577 aa22.19■■□□□ 1.14
FDPS-211ENST00000477057 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
FDPS-211ENST00000477057 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
FDPS-211ENST00000477057 CUX1P39880 1505 aa22.04■■□□□ 1.12
FDPS-211ENST00000477057 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
FDPS-211ENST00000477057 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
FDPS-211ENST00000477057 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
FDPS-211ENST00000477057 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
FDPS-211ENST00000477057 RAD54L2Q9Y4B4 1467 aa21.95■■□□□ 1.1
FDPS-211ENST00000477057 SOGA1O94964 1423 aa21.94■■□□□ 1.1
FDPS-211ENST00000477057 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
FDPS-211ENST00000477057 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
FDPS-211ENST00000477057 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
FDPS-211ENST00000477057 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.093e-7■■■■□ 23.6
FDPS-211ENST00000477057 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
FDPS-211ENST00000477057 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
FDPS-211ENST00000477057 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
FDPS-211ENST00000477057 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
FDPS-211ENST00000477057 WDR97A6NE52 1622 aa21.77■■□□□ 1.07
FDPS-211ENST00000477057 ABCA10Q8WWZ4 1543 aa21.72■■□□□ 1.07
FDPS-211ENST00000477057 FBLN2P98095 1184 aa21.71■■□□□ 1.07
FDPS-211ENST00000477057 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
FDPS-211ENST00000477057 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
FDPS-211ENST00000477057 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
FDPS-211ENST00000477057 PBRM1Q86U86 1689 aa21.68■■□□□ 1.06
FDPS-211ENST00000477057 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
FDPS-211ENST00000477057 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
FDPS-211ENST00000477057 CHD1O14646 1710 aa21.63■■□□□ 1.05
FDPS-211ENST00000477057 MAGI1Q96QZ7 1491 aaPredicted RBP21.59■■□□□ 1.05
FDPS-211ENST00000477057 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
FDPS-211ENST00000477057 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
FDPS-211ENST00000477057 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
FDPS-211ENST00000477057 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
FDPS-211ENST00000477057 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
FDPS-211ENST00000477057 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
FDPS-211ENST00000477057 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
FDPS-211ENST00000477057 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
FDPS-211ENST00000477057 CUL7Q14999 1698 aa21.33■■□□□ 1
FDPS-211ENST00000477057 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
FDPS-211ENST00000477057 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
FDPS-211ENST00000477057 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
FDPS-211ENST00000477057 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
FDPS-211ENST00000477057 IGF1RP08069 1367 aa21.31■■□□□ 1
FDPS-211ENST00000477057 ARHGEF11O15085 1522 aa21.3■■□□□ 1
FDPS-211ENST00000477057 CEP170Q5SW79 1584 aa21.29■■□□□ 1
FDPS-211ENST00000477057 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
FDPS-211ENST00000477057 CARMIL1Q5VZK9 1371 aa21.25■□□□□ 0.99
FDPS-211ENST00000477057 NUP160Q12769 1436 aa21.24■□□□□ 0.99
FDPS-211ENST00000477057 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
FDPS-211ENST00000477057 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
FDPS-211ENST00000477057 FAM9AQ8IZU1 332 aaPredicted RBP21.16■□□□□ 0.98
FDPS-211ENST00000477057 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms