RNA–Protein interactions for RNA: ENST00000358743.5

SMTN-203, Transcript of smoothelin, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SMTN, Length 3,198 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-203ENST00000358743 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
SMTN-203ENST00000358743 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
SMTN-203ENST00000358743 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
SMTN-203ENST00000358743 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.34
SMTN-203ENST00000358743 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
SMTN-203ENST00000358743 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
SMTN-203ENST00000358743 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
SMTN-203ENST00000358743 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
SMTN-203ENST00000358743 MYT1Q01538 1121 aa22.42■■□□□ 1.18
SMTN-203ENST00000358743 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
SMTN-203ENST00000358743 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
SMTN-203ENST00000358743 ABCC9O60706 1549 aa22.02■■□□□ 1.12
SMTN-203ENST00000358743 HRCP23327 699 aa21.98■■□□□ 1.11
SMTN-203ENST00000358743 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
SMTN-203ENST00000358743 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
SMTN-203ENST00000358743 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
SMTN-203ENST00000358743 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
SMTN-203ENST00000358743 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
SMTN-203ENST00000358743 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
SMTN-203ENST00000358743 NACADO15069 1562 aa21.65■■□□□ 1.06
SMTN-203ENST00000358743 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
SMTN-203ENST00000358743 PPARGC1BQ86YN6 1023 aaKnown RBP21.48■■□□□ 1.03
SMTN-203ENST00000358743 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
SMTN-203ENST00000358743 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
SMTN-203ENST00000358743 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
SMTN-203ENST00000358743 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
SMTN-203ENST00000358743 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
SMTN-203ENST00000358743 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
SMTN-203ENST00000358743 WIZO95785 1651 aa21.25■□□□□ 0.99
SMTN-203ENST00000358743 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
SMTN-203ENST00000358743 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
SMTN-203ENST00000358743 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
SMTN-203ENST00000358743 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
SMTN-203ENST00000358743 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
SMTN-203ENST00000358743 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.943e-10■■■■□ 19.6
SMTN-203ENST00000358743 ZEB1P37275 1124 aaPredicted RBP20.95■□□□□ 0.94
SMTN-203ENST00000358743 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
SMTN-203ENST00000358743 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
SMTN-203ENST00000358743 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
SMTN-203ENST00000358743 BCL11AQ9H165 835 aa20.72■□□□□ 0.91
SMTN-203ENST00000358743 PRKCSHP14314 528 aaPredicted RBP20.7■□□□□ 0.9
SMTN-203ENST00000358743 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
SMTN-203ENST00000358743 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
SMTN-203ENST00000358743 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
SMTN-203ENST00000358743 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
SMTN-203ENST00000358743 EEA1Q15075 1411 aa20.61■□□□□ 0.89
SMTN-203ENST00000358743 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
SMTN-203ENST00000358743 SOGA1O94964 1423 aa20.56■□□□□ 0.88
SMTN-203ENST00000358743 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
SMTN-203ENST00000358743 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
SMTN-203ENST00000358743 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
SMTN-203ENST00000358743 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
SMTN-203ENST00000358743 GTF3C3Q9Y5Q9 886 aa20.5■□□□□ 0.87
SMTN-203ENST00000358743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.5■□□□□ 0.87
SMTN-203ENST00000358743 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
SMTN-203ENST00000358743 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
SMTN-203ENST00000358743 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
SMTN-203ENST00000358743 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
SMTN-203ENST00000358743 CCER1Q8TC90 406 aaPredicted RBP20.38■□□□□ 0.85
SMTN-203ENST00000358743 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
SMTN-203ENST00000358743 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
SMTN-203ENST00000358743 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
SMTN-203ENST00000358743 KIF21BO75037 1637 aa20.32■□□□□ 0.84
SMTN-203ENST00000358743 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
SMTN-203ENST00000358743 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
SMTN-203ENST00000358743 HNRNPUL2Q1KMD3 747 aaKnown RBP20.15■□□□□ 0.82
SMTN-203ENST00000358743 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
SMTN-203ENST00000358743 CLIP1P30622 1438 aa20.14■□□□□ 0.82
SMTN-203ENST00000358743 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
SMTN-203ENST00000358743 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
SMTN-203ENST00000358743 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.81
SMTN-203ENST00000358743 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
SMTN-203ENST00000358743 ANP32EQ9BTT0 268 aa20.02■□□□□ 0.8
SMTN-203ENST00000358743 APLP2Q06481 763 aa20.01■□□□□ 0.79
SMTN-203ENST00000358743 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
SMTN-203ENST00000358743 NCAPD3P42695 1498 aa20■□□□□ 0.79
SMTN-203ENST00000358743 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
SMTN-203ENST00000358743 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
SMTN-203ENST00000358743 CUX1P39880 1505 aa19.89■□□□□ 0.77
SMTN-203ENST00000358743 ZNF316A6NFI3 1004 aaPredicted RBP19.88■□□□□ 0.77
SMTN-203ENST00000358743 ITGAEP38570 1179 aa19.86■□□□□ 0.77
SMTN-203ENST00000358743 CFTRP13569 1480 aa19.86■□□□□ 0.77
SMTN-203ENST00000358743 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
SMTN-203ENST00000358743 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
SMTN-203ENST00000358743 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
SMTN-203ENST00000358743 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
SMTN-203ENST00000358743 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
SMTN-203ENST00000358743 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
SMTN-203ENST00000358743 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
SMTN-203ENST00000358743 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
SMTN-203ENST00000358743 ARHGAP35Q9NRY4 1499 aa19.65■□□□□ 0.74
SMTN-203ENST00000358743 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
SMTN-203ENST00000358743 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
SMTN-203ENST00000358743 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
SMTN-203ENST00000358743 CUX2O14529 1486 aa19.58■□□□□ 0.73
SMTN-203ENST00000358743 IGF1RP08069 1367 aa19.58■□□□□ 0.72
SMTN-203ENST00000358743 MIER1Q8N108 512 aa19.55■□□□□ 0.72
SMTN-203ENST00000358743 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
SMTN-203ENST00000358743 CCNB3Q8WWL7 1395 aa19.53■□□□□ 0.72
SMTN-203ENST00000358743 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms