Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
NCKAP1Q9Y2A7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.11■■□□□ 1.61
NCKAP1Q9Y2A7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
NCKAP1Q9Y2A7 SMPD5-203ENST00000639008 1464 ntBASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 AC007029.1-201ENST00000604183 313 ntBASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
NCKAP1Q9Y2A7 KRT18P60-201ENST00000312876 1297 ntBASIC25.08■■□□□ 1.61
NCKAP1Q9Y2A7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
NCKAP1Q9Y2A7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NCKAP1Q9Y2A7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NCKAP1Q9Y2A7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.6
NCKAP1Q9Y2A7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NCKAP1Q9Y2A7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NCKAP1Q9Y2A7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.07■■□□□ 1.6
NCKAP1Q9Y2A7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NCKAP1Q9Y2A7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
NCKAP1Q9Y2A7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NCKAP1Q9Y2A7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.05■■□□□ 1.6
NCKAP1Q9Y2A7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NCKAP1Q9Y2A7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.05■■□□□ 1.6
NCKAP1Q9Y2A7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NCKAP1Q9Y2A7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NCKAP1Q9Y2A7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NCKAP1Q9Y2A7 ABCB10P1-201ENST00000614297 2181 ntBASIC25.04■■□□□ 1.6
NCKAP1Q9Y2A7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.04■■□□□ 1.6
NCKAP1Q9Y2A7 TSPY13P-201ENST00000338964 914 ntBASIC25.04■■□□□ 1.6
NCKAP1Q9Y2A7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NCKAP1Q9Y2A7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
NCKAP1Q9Y2A7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NCKAP1Q9Y2A7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NCKAP1Q9Y2A7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.03■■□□□ 1.6
NCKAP1Q9Y2A7 AC004987.1-201ENST00000428627 508 ntBASIC25.02■■□□□ 1.6
NCKAP1Q9Y2A7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.02■■□□□ 1.6
NCKAP1Q9Y2A7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
NCKAP1Q9Y2A7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NCKAP1Q9Y2A7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NCKAP1Q9Y2A7 ATP5G2P3-201ENST00000429083 425 ntBASIC25.01■■□□□ 1.59
NCKAP1Q9Y2A7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NCKAP1Q9Y2A7 AC133552.2-201ENST00000619106 1032 ntBASIC25.01■■□□□ 1.59
NCKAP1Q9Y2A7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NCKAP1Q9Y2A7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25■■□□□ 1.59
NCKAP1Q9Y2A7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
NCKAP1Q9Y2A7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NCKAP1Q9Y2A7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.99■■□□□ 1.59
NCKAP1Q9Y2A7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.98■■□□□ 1.59
NCKAP1Q9Y2A7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NCKAP1Q9Y2A7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.98■■□□□ 1.59
NCKAP1Q9Y2A7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NCKAP1Q9Y2A7 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.98■■□□□ 1.59
NCKAP1Q9Y2A7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NCKAP1Q9Y2A7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NCKAP1Q9Y2A7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.97■■□□□ 1.59
NCKAP1Q9Y2A7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NCKAP1Q9Y2A7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
NCKAP1Q9Y2A7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
NCKAP1Q9Y2A7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NCKAP1Q9Y2A7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NCKAP1Q9Y2A7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.96■■□□□ 1.59
NCKAP1Q9Y2A7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NCKAP1Q9Y2A7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.96■■□□□ 1.59
NCKAP1Q9Y2A7 AC025884.2-201ENST00000553429 711 ntBASIC24.96■■□□□ 1.59
NCKAP1Q9Y2A7 AC009831.1-201ENST00000580420 1582 ntBASIC24.96■■□□□ 1.59
NCKAP1Q9Y2A7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 RP9P-202ENST00000450133 1212 ntBASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 AL592293.1-201ENST00000502889 1188 ntBASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
NCKAP1Q9Y2A7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
NCKAP1Q9Y2A7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NCKAP1Q9Y2A7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NCKAP1Q9Y2A7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.94■■□□□ 1.58
NCKAP1Q9Y2A7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
NCKAP1Q9Y2A7 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.94■■□□□ 1.58
NCKAP1Q9Y2A7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NCKAP1Q9Y2A7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.93■■□□□ 1.58
NCKAP1Q9Y2A7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
NCKAP1Q9Y2A7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
NCKAP1Q9Y2A7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NCKAP1Q9Y2A7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NCKAP1Q9Y2A7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
NCKAP1Q9Y2A7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
NCKAP1Q9Y2A7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
NCKAP1Q9Y2A7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms