Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AP002414.2-202ENST00000590929 1450 ntBASIC24.29■■□□□ 1.48
LRIT1Q9P2V4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRIT1Q9P2V4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LRIT1Q9P2V4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRIT1Q9P2V4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRIT1Q9P2V4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRIT1Q9P2V4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LRIT1Q9P2V4 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.27■■□□□ 1.48
LRIT1Q9P2V4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRIT1Q9P2V4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
LRIT1Q9P2V4 KRT18P60-201ENST00000312876 1297 ntBASIC24.26■■□□□ 1.47
LRIT1Q9P2V4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
LRIT1Q9P2V4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.26■■□□□ 1.47
LRIT1Q9P2V4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.26■■□□□ 1.47
LRIT1Q9P2V4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.25■■□□□ 1.47
LRIT1Q9P2V4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
LRIT1Q9P2V4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
LRIT1Q9P2V4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRIT1Q9P2V4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 AC007029.1-201ENST00000604183 313 ntBASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 SMPD5-203ENST00000639008 1464 ntBASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRIT1Q9P2V4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRIT1Q9P2V4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.23■■□□□ 1.47
LRIT1Q9P2V4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.23■■□□□ 1.47
LRIT1Q9P2V4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRIT1Q9P2V4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRIT1Q9P2V4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.23■■□□□ 1.47
LRIT1Q9P2V4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRIT1Q9P2V4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRIT1Q9P2V4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
LRIT1Q9P2V4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LRIT1Q9P2V4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRIT1Q9P2V4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 TSPY13P-201ENST00000338964 914 ntBASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 AC004987.1-201ENST00000428627 508 ntBASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LRIT1Q9P2V4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRIT1Q9P2V4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
LRIT1Q9P2V4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRIT1Q9P2V4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRIT1Q9P2V4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRIT1Q9P2V4 ATP5G2P3-201ENST00000429083 425 ntBASIC24.18■■□□□ 1.46
LRIT1Q9P2V4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.18■■□□□ 1.46
LRIT1Q9P2V4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.18■■□□□ 1.46
LRIT1Q9P2V4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.18■■□□□ 1.46
LRIT1Q9P2V4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRIT1Q9P2V4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.17■■□□□ 1.46
LRIT1Q9P2V4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRIT1Q9P2V4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.17■■□□□ 1.46
LRIT1Q9P2V4 AC133552.2-201ENST00000619106 1032 ntBASIC24.17■■□□□ 1.46
LRIT1Q9P2V4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
LRIT1Q9P2V4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LRIT1Q9P2V4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRIT1Q9P2V4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.16■■□□□ 1.46
LRIT1Q9P2V4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LRIT1Q9P2V4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.16■■□□□ 1.46
LRIT1Q9P2V4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
LRIT1Q9P2V4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
LRIT1Q9P2V4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRIT1Q9P2V4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRIT1Q9P2V4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LRIT1Q9P2V4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.14■■□□□ 1.45
LRIT1Q9P2V4 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.14■■□□□ 1.45
LRIT1Q9P2V4 AC009831.1-201ENST00000580420 1582 ntBASIC24.14■■□□□ 1.45
LRIT1Q9P2V4 AC139426.1-201ENST00000568218 2529 ntBASIC24.14■■□□□ 1.45
LRIT1Q9P2V4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.13■■□□□ 1.45
LRIT1Q9P2V4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRIT1Q9P2V4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LRIT1Q9P2V4 AC025884.2-201ENST00000553429 711 ntBASIC24.13■■□□□ 1.45
LRIT1Q9P2V4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LRIT1Q9P2V4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRIT1Q9P2V4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRIT1Q9P2V4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
LRIT1Q9P2V4 AL592293.1-201ENST00000502889 1188 ntBASIC24.12■■□□□ 1.45
LRIT1Q9P2V4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
LRIT1Q9P2V4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRIT1Q9P2V4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRIT1Q9P2V4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRIT1Q9P2V4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRIT1Q9P2V4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.11■■□□□ 1.45
LRIT1Q9P2V4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRIT1Q9P2V4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRIT1Q9P2V4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.1■■□□□ 1.45
LRIT1Q9P2V4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms