Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYRM4Q9HD34 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
LYRM4Q9HD34 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LYRM4Q9HD34 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LYRM4Q9HD34 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
LYRM4Q9HD34 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.56■■□□□ 1.36
LYRM4Q9HD34 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.56■■□□□ 1.36
LYRM4Q9HD34 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.56■■□□□ 1.36
LYRM4Q9HD34 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
LYRM4Q9HD34 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LYRM4Q9HD34 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYRM4Q9HD34 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LYRM4Q9HD34 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYRM4Q9HD34 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYRM4Q9HD34 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
LYRM4Q9HD34 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.53■■□□□ 1.36
LYRM4Q9HD34 WHAMMP3-201ENST00000611636 1609 ntBASIC23.53■■□□□ 1.36
LYRM4Q9HD34 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
LYRM4Q9HD34 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.53■■□□□ 1.36
LYRM4Q9HD34 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LYRM4Q9HD34 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LYRM4Q9HD34 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
LYRM4Q9HD34 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LYRM4Q9HD34 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.52■■□□□ 1.36
LYRM4Q9HD34 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LYRM4Q9HD34 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.51■■□□□ 1.35
LYRM4Q9HD34 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LYRM4Q9HD34 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.51■■□□□ 1.35
LYRM4Q9HD34 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
LYRM4Q9HD34 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LYRM4Q9HD34 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
LYRM4Q9HD34 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
LYRM4Q9HD34 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LYRM4Q9HD34 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.49■■□□□ 1.35
LYRM4Q9HD34 AC126177.7-201ENST00000547904 679 ntBASIC23.49■■□□□ 1.35
LYRM4Q9HD34 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.49■■□□□ 1.35
LYRM4Q9HD34 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LYRM4Q9HD34 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LYRM4Q9HD34 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LYRM4Q9HD34 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LYRM4Q9HD34 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
LYRM4Q9HD34 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LYRM4Q9HD34 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.47■■□□□ 1.35
LYRM4Q9HD34 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.47■■□□□ 1.35
LYRM4Q9HD34 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LYRM4Q9HD34 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LYRM4Q9HD34 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
LYRM4Q9HD34 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
LYRM4Q9HD34 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
LYRM4Q9HD34 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
LYRM4Q9HD34 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
LYRM4Q9HD34 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.45■■□□□ 1.34
LYRM4Q9HD34 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
LYRM4Q9HD34 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
LYRM4Q9HD34 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
LYRM4Q9HD34 AL449106.1-201ENST00000608517 1980 ntBASIC23.45■■□□□ 1.34
LYRM4Q9HD34 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LYRM4Q9HD34 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
LYRM4Q9HD34 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
LYRM4Q9HD34 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.44■■□□□ 1.34
LYRM4Q9HD34 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.44■■□□□ 1.34
LYRM4Q9HD34 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LYRM4Q9HD34 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.44■■□□□ 1.34
LYRM4Q9HD34 AL359258.2-201ENST00000564063 1566 ntBASIC23.44■■□□□ 1.34
LYRM4Q9HD34 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
LYRM4Q9HD34 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LYRM4Q9HD34 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
LYRM4Q9HD34 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
LYRM4Q9HD34 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.42■■□□□ 1.34
LYRM4Q9HD34 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
LYRM4Q9HD34 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
LYRM4Q9HD34 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LYRM4Q9HD34 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
LYRM4Q9HD34 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms