Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRC40Q9H9A6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.34■■□□□ 1.65
LRRC40Q9H9A6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.33■■□□□ 1.65
LRRC40Q9H9A6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.33■■□□□ 1.65
LRRC40Q9H9A6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC40Q9H9A6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.32■■□□□ 1.64
LRRC40Q9H9A6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.32■■□□□ 1.64
LRRC40Q9H9A6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC40Q9H9A6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC40Q9H9A6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
LRRC40Q9H9A6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LRRC40Q9H9A6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
LRRC40Q9H9A6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.31■■□□□ 1.64
LRRC40Q9H9A6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC40Q9H9A6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC40Q9H9A6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.31■■□□□ 1.64
LRRC40Q9H9A6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.31■■□□□ 1.64
LRRC40Q9H9A6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC40Q9H9A6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.3■■□□□ 1.64
LRRC40Q9H9A6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC40Q9H9A6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.29■■□□□ 1.64
LRRC40Q9H9A6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
LRRC40Q9H9A6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC40Q9H9A6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC40Q9H9A6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC40Q9H9A6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC40Q9H9A6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.27■■□□□ 1.64
LRRC40Q9H9A6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.27■■□□□ 1.64
LRRC40Q9H9A6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.27■■□□□ 1.64
LRRC40Q9H9A6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC40Q9H9A6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.26■■□□□ 1.63
LRRC40Q9H9A6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
LRRC40Q9H9A6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
LRRC40Q9H9A6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC40Q9H9A6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC40Q9H9A6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC40Q9H9A6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC40Q9H9A6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.24■■□□□ 1.63
LRRC40Q9H9A6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC40Q9H9A6 ABHD17AP4-201ENST00000411545 909 ntBASIC25.24■■□□□ 1.63
LRRC40Q9H9A6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC40Q9H9A6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC40Q9H9A6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC40Q9H9A6 AC008813.1-201ENST00000536597 885 ntBASIC25.23■■□□□ 1.63
LRRC40Q9H9A6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
LRRC40Q9H9A6 AL449106.1-201ENST00000608517 1980 ntBASIC25.23■■□□□ 1.63
LRRC40Q9H9A6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC40Q9H9A6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC40Q9H9A6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC40Q9H9A6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC40Q9H9A6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
LRRC40Q9H9A6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.21■■□□□ 1.63
LRRC40Q9H9A6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.21■■□□□ 1.63
LRRC40Q9H9A6 WHAMMP3-201ENST00000611636 1609 ntBASIC25.2■■□□□ 1.62
LRRC40Q9H9A6 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.2■■□□□ 1.62
LRRC40Q9H9A6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.2■■□□□ 1.62
LRRC40Q9H9A6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LRRC40Q9H9A6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LRRC40Q9H9A6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.19■■□□□ 1.62
LRRC40Q9H9A6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.18■■□□□ 1.62
LRRC40Q9H9A6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC40Q9H9A6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC40Q9H9A6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.18■■□□□ 1.62
LRRC40Q9H9A6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
LRRC40Q9H9A6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
LRRC40Q9H9A6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC40Q9H9A6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC40Q9H9A6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC40Q9H9A6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
LRRC40Q9H9A6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.16■■□□□ 1.62
LRRC40Q9H9A6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC40Q9H9A6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC40Q9H9A6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.16■■□□□ 1.62
LRRC40Q9H9A6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC40Q9H9A6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LRRC40Q9H9A6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
LRRC40Q9H9A6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
LRRC40Q9H9A6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.14■■□□□ 1.62
LRRC40Q9H9A6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
LRRC40Q9H9A6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
LRRC40Q9H9A6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LRRC40Q9H9A6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LRRC40Q9H9A6 AP004609.3-201ENST00000610705 1884 ntBASIC25.13■■□□□ 1.61
LRRC40Q9H9A6 CR559946.2-201ENST00000623684 991 ntBASIC25.13■■□□□ 1.61
LRRC40Q9H9A6 AC148477.6-201ENST00000623746 465 ntBASIC25.13■■□□□ 1.61
LRRC40Q9H9A6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.12■■□□□ 1.61
LRRC40Q9H9A6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.12■■□□□ 1.61
LRRC40Q9H9A6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LRRC40Q9H9A6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.12■■□□□ 1.61
LRRC40Q9H9A6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.12■■□□□ 1.61
LRRC40Q9H9A6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms