Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.49■■■□□ 2.63
CHMP4BQ9H444 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.49■■■□□ 2.63
CHMP4BQ9H444 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CHMP4BQ9H444 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
CHMP4BQ9H444 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.48■■■□□ 2.63
CHMP4BQ9H444 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHMP4BQ9H444 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHMP4BQ9H444 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
CHMP4BQ9H444 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.47■■■□□ 2.63
CHMP4BQ9H444 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
CHMP4BQ9H444 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 AC148477.6-201ENST00000623746 465 ntBASIC31.43■■■□□ 2.62
CHMP4BQ9H444 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.42■■■□□ 2.62
CHMP4BQ9H444 WHAMMP3-201ENST00000611636 1609 ntBASIC31.42■■■□□ 2.62
CHMP4BQ9H444 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHMP4BQ9H444 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CHMP4BQ9H444 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHMP4BQ9H444 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.39■■■□□ 2.62
CHMP4BQ9H444 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHMP4BQ9H444 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CHMP4BQ9H444 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHMP4BQ9H444 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.37■■■□□ 2.61
CHMP4BQ9H444 AL449106.1-201ENST00000608517 1980 ntBASIC31.37■■■□□ 2.61
CHMP4BQ9H444 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 CR559946.2-201ENST00000623684 991 ntBASIC31.34■■■□□ 2.61
CHMP4BQ9H444 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.33■■■□□ 2.61
CHMP4BQ9H444 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CHMP4BQ9H444 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MIR3648-2-201ENST00000581792 180 ntBASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MIR3648-1-201ENST00000615959 180 ntBASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MIR219A2-201ENST00000608502 1504 ntBASIC31.32■■■□□ 2.6
CHMP4BQ9H444 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CHMP4BQ9H444 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.31■■■□□ 2.6
CHMP4BQ9H444 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CHMP4BQ9H444 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
CHMP4BQ9H444 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHMP4BQ9H444 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.28■■■□□ 2.6
CHMP4BQ9H444 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CHMP4BQ9H444 HLA-V-202ENST00000446817 847 ntBASIC31.26■■■□□ 2.59
CHMP4BQ9H444 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
CHMP4BQ9H444 AP004609.3-201ENST00000610705 1884 ntBASIC31.26■■■□□ 2.59
CHMP4BQ9H444 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP4BQ9H444 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP4BQ9H444 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 AC142472.1-201ENST00000612013 1741 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms