Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ARHGEF39Q8N4T4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.78■■□□□ 1.4
ARHGEF39Q8N4T4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ARHGEF39Q8N4T4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARHGEF39Q8N4T4 AC142086.6-201ENST00000621154 1765 ntBASIC23.76■■□□□ 1.39
ARHGEF39Q8N4T4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ARHGEF39Q8N4T4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ARHGEF39Q8N4T4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.75■■□□□ 1.39
ARHGEF39Q8N4T4 LINC01003-201ENST00000564834 1764 ntBASIC23.75■■□□□ 1.39
ARHGEF39Q8N4T4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 AC060814.1-201ENST00000554326 538 ntBASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.74■■□□□ 1.39
ARHGEF39Q8N4T4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
ARHGEF39Q8N4T4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ARHGEF39Q8N4T4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ARHGEF39Q8N4T4 GPX1-201ENST00000419349 1106 ntBASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ARHGEF39Q8N4T4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.71■■□□□ 1.39
ARHGEF39Q8N4T4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ARHGEF39Q8N4T4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.7■■□□□ 1.38
ARHGEF39Q8N4T4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ARHGEF39Q8N4T4 AC022413.1-201ENST00000624602 984 ntBASIC23.69■■□□□ 1.38
ARHGEF39Q8N4T4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ARHGEF39Q8N4T4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ARHGEF39Q8N4T4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
ARHGEF39Q8N4T4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ARHGEF39Q8N4T4 AC092296.2-201ENST00000589470 999 ntBASIC23.67■■□□□ 1.38
ARHGEF39Q8N4T4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 BX255925.1-201ENST00000566954 1854 ntBASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.66■■□□□ 1.38
ARHGEF39Q8N4T4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
ARHGEF39Q8N4T4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.64■■□□□ 1.38
ARHGEF39Q8N4T4 AL157400.5-201ENST00000507624 621 ntBASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ARHGEF39Q8N4T4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 AC126177.7-201ENST00000547904 679 ntBASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 AL359258.2-201ENST00000564063 1566 ntBASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.63■■□□□ 1.37
ARHGEF39Q8N4T4 RNF126P1-201ENST00000567452 1320 ntBASIC23.62■■□□□ 1.37
ARHGEF39Q8N4T4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ARHGEF39Q8N4T4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ARHGEF39Q8N4T4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.61■■□□□ 1.37
ARHGEF39Q8N4T4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ARHGEF39Q8N4T4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.6■■□□□ 1.37
ARHGEF39Q8N4T4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 WHAMMP3-201ENST00000611636 1609 ntBASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
ARHGEF39Q8N4T4 RARRES2P2-201ENST00000394842 485 ntBASIC23.58■■□□□ 1.37
ARHGEF39Q8N4T4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ARHGEF39Q8N4T4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ARHGEF39Q8N4T4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.56■■□□□ 1.36
ARHGEF39Q8N4T4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF39Q8N4T4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ARHGEF39Q8N4T4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms