Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.38■■□□□ 1.65
PGBD3Q8N328 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PGBD3Q8N328 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.38■■□□□ 1.65
PGBD3Q8N328 AP004833.2-201ENST00000532228 1454 ntBASIC25.38■■□□□ 1.65
PGBD3Q8N328 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PGBD3Q8N328 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.37■■□□□ 1.65
PGBD3Q8N328 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.37■■□□□ 1.65
PGBD3Q8N328 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PGBD3Q8N328 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 AL157400.5-201ENST00000507624 621 ntBASIC25.36■■□□□ 1.65
PGBD3Q8N328 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.36■■□□□ 1.65
PGBD3Q8N328 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PGBD3Q8N328 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PGBD3Q8N328 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PGBD3Q8N328 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.34■■□□□ 1.65
PGBD3Q8N328 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PGBD3Q8N328 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.34■■□□□ 1.65
PGBD3Q8N328 AC007029.1-201ENST00000604183 313 ntBASIC25.33■■□□□ 1.65
PGBD3Q8N328 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PGBD3Q8N328 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 AL359258.2-201ENST00000564063 1566 ntBASIC25.32■■□□□ 1.64
PGBD3Q8N328 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.32■■□□□ 1.64
PGBD3Q8N328 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PGBD3Q8N328 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PGBD3Q8N328 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.31■■□□□ 1.64
PGBD3Q8N328 AC133552.2-201ENST00000619106 1032 ntBASIC25.31■■□□□ 1.64
PGBD3Q8N328 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PGBD3Q8N328 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.3■■□□□ 1.64
PGBD3Q8N328 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.29■■□□□ 1.64
PGBD3Q8N328 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 SMPD5-203ENST00000639008 1464 ntBASIC25.29■■□□□ 1.64
PGBD3Q8N328 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 DUX4L18-201ENST00000553347 1267 ntBASIC25.29■■□□□ 1.64
PGBD3Q8N328 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PGBD3Q8N328 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
PGBD3Q8N328 RARRES2P1-201ENST00000474487 481 ntBASIC25.28■■□□□ 1.64
PGBD3Q8N328 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.28■■□□□ 1.64
PGBD3Q8N328 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PGBD3Q8N328 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PGBD3Q8N328 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PGBD3Q8N328 AL592293.1-201ENST00000502889 1188 ntBASIC25.27■■□□□ 1.64
PGBD3Q8N328 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PGBD3Q8N328 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGBD3Q8N328 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PGBD3Q8N328 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PGBD3Q8N328 AC129492.7-201ENST00000622992 756 ntBASIC25.26■■□□□ 1.63
PGBD3Q8N328 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
PGBD3Q8N328 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PGBD3Q8N328 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.25■■□□□ 1.63
PGBD3Q8N328 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PGBD3Q8N328 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.25■■□□□ 1.63
PGBD3Q8N328 AC009831.1-201ENST00000580420 1582 ntBASIC25.25■■□□□ 1.63
PGBD3Q8N328 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.25■■□□□ 1.63
PGBD3Q8N328 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PGBD3Q8N328 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGBD3Q8N328 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.24■■□□□ 1.63
PGBD3Q8N328 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
PGBD3Q8N328 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PGBD3Q8N328 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PGBD3Q8N328 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGBD3Q8N328 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PGBD3Q8N328 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.23■■□□□ 1.63
PGBD3Q8N328 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PGBD3Q8N328 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PGBD3Q8N328 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PGBD3Q8N328 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PGBD3Q8N328 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.21■■□□□ 1.63
PGBD3Q8N328 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
PGBD3Q8N328 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.2■■□□□ 1.62
PGBD3Q8N328 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.19■■□□□ 1.62
PGBD3Q8N328 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.18■■□□□ 1.62
PGBD3Q8N328 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.18■■□□□ 1.62
PGBD3Q8N328 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
PGBD3Q8N328 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGBD3Q8N328 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PGBD3Q8N328 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms