Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
CCDC146Q8IYE0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
CCDC146Q8IYE0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC33.21■■■□□ 2.91
CCDC146Q8IYE0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CCDC146Q8IYE0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC33.21■■■□□ 2.91
CCDC146Q8IYE0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
CCDC146Q8IYE0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC33.2■■■□□ 2.91
CCDC146Q8IYE0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC33.2■■■□□ 2.91
CCDC146Q8IYE0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC33.2■■■□□ 2.9
CCDC146Q8IYE0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
CCDC146Q8IYE0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
CCDC146Q8IYE0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC33.18■■■□□ 2.9
CCDC146Q8IYE0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
CCDC146Q8IYE0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
CCDC146Q8IYE0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CCDC146Q8IYE0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC33.17■■■□□ 2.9
CCDC146Q8IYE0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CCDC146Q8IYE0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
CCDC146Q8IYE0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.16■■■□□ 2.9
CCDC146Q8IYE0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
CCDC146Q8IYE0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CCDC146Q8IYE0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC33.16■■■□□ 2.9
CCDC146Q8IYE0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC33.15■■■□□ 2.9
CCDC146Q8IYE0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC33.15■■■□□ 2.9
CCDC146Q8IYE0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CCDC146Q8IYE0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CCDC146Q8IYE0 MED25-210ENST00000612854 801 ntTSL 5 BASIC33.13■■■□□ 2.89
CCDC146Q8IYE0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CCDC146Q8IYE0 MED25-214ENST00000622402 642 ntTSL 5 BASIC33.13■■■□□ 2.89
CCDC146Q8IYE0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
CCDC146Q8IYE0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC33.12■■■□□ 2.89
CCDC146Q8IYE0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CCDC146Q8IYE0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC33.11■■■□□ 2.89
CCDC146Q8IYE0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC33.11■■■□□ 2.89
CCDC146Q8IYE0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
CCDC146Q8IYE0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CCDC146Q8IYE0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CCDC146Q8IYE0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CCDC146Q8IYE0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC33.1■■■□□ 2.89
CCDC146Q8IYE0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC33.09■■■□□ 2.89
CCDC146Q8IYE0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC33.09■■■□□ 2.89
CCDC146Q8IYE0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CCDC146Q8IYE0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CCDC146Q8IYE0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CCDC146Q8IYE0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CCDC146Q8IYE0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CCDC146Q8IYE0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CCDC146Q8IYE0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
CCDC146Q8IYE0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC146Q8IYE0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC146Q8IYE0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC33.07■■■□□ 2.88
CCDC146Q8IYE0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC146Q8IYE0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC33.07■■■□□ 2.88
CCDC146Q8IYE0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC146Q8IYE0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC33.07■■■□□ 2.88
CCDC146Q8IYE0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC146Q8IYE0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC33.05■■■□□ 2.88
CCDC146Q8IYE0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC33.05■■■□□ 2.88
CCDC146Q8IYE0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
CCDC146Q8IYE0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC33.05■■■□□ 2.88
CCDC146Q8IYE0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC146Q8IYE0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC146Q8IYE0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
CCDC146Q8IYE0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC146Q8IYE0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC33.04■■■□□ 2.88
CCDC146Q8IYE0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC146Q8IYE0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC146Q8IYE0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC146Q8IYE0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC33.02■■■□□ 2.88
CCDC146Q8IYE0 AL449106.1-201ENST00000608517 1980 ntBASIC33.02■■■□□ 2.88
CCDC146Q8IYE0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC146Q8IYE0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC146Q8IYE0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC146Q8IYE0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CCDC146Q8IYE0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC33.01■■■□□ 2.87
CCDC146Q8IYE0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CCDC146Q8IYE0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC33.01■■■□□ 2.87
CCDC146Q8IYE0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CCDC146Q8IYE0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CCDC146Q8IYE0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
CCDC146Q8IYE0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.99■■■□□ 2.87
CCDC146Q8IYE0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms