Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
LRRTM4Q86VH4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LRRTM4Q86VH4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.62■■□□□ 1.53
LRRTM4Q86VH4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM4Q86VH4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM4Q86VH4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM4Q86VH4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM4Q86VH4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.62■■□□□ 1.53
LRRTM4Q86VH4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LRRTM4Q86VH4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM4Q86VH4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM4Q86VH4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.61■■□□□ 1.53
LRRTM4Q86VH4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM4Q86VH4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM4Q86VH4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM4Q86VH4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LRRTM4Q86VH4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.6■■□□□ 1.53
LRRTM4Q86VH4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
LRRTM4Q86VH4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LRRTM4Q86VH4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LRRTM4Q86VH4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
LRRTM4Q86VH4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.58■■□□□ 1.53
LRRTM4Q86VH4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRTM4Q86VH4 AC060814.1-201ENST00000554326 538 ntBASIC24.58■■□□□ 1.53
LRRTM4Q86VH4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
LRRTM4Q86VH4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
LRRTM4Q86VH4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.58■■□□□ 1.52
LRRTM4Q86VH4 AC142086.6-201ENST00000621154 1765 ntBASIC24.57■■□□□ 1.52
LRRTM4Q86VH4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LRRTM4Q86VH4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.57■■□□□ 1.52
LRRTM4Q86VH4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.57■■□□□ 1.52
LRRTM4Q86VH4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.56■■□□□ 1.52
LRRTM4Q86VH4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM4Q86VH4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LRRTM4Q86VH4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
LRRTM4Q86VH4 LINC01003-201ENST00000564834 1764 ntBASIC24.54■■□□□ 1.52
LRRTM4Q86VH4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.54■■□□□ 1.52
LRRTM4Q86VH4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRRTM4Q86VH4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRTM4Q86VH4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.53■■□□□ 1.52
LRRTM4Q86VH4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.53■■□□□ 1.52
LRRTM4Q86VH4 AL359258.2-201ENST00000564063 1566 ntBASIC24.53■■□□□ 1.52
LRRTM4Q86VH4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LRRTM4Q86VH4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LRRTM4Q86VH4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRRTM4Q86VH4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LRRTM4Q86VH4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LRRTM4Q86VH4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.51■■□□□ 1.51
LRRTM4Q86VH4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRTM4Q86VH4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.51■■□□□ 1.51
LRRTM4Q86VH4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRRTM4Q86VH4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRRTM4Q86VH4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.5■■□□□ 1.51
LRRTM4Q86VH4 RNF126P1-201ENST00000567452 1320 ntBASIC24.5■■□□□ 1.51
LRRTM4Q86VH4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRRTM4Q86VH4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.49■■□□□ 1.51
LRRTM4Q86VH4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
LRRTM4Q86VH4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.49■■□□□ 1.51
LRRTM4Q86VH4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LRRTM4Q86VH4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
LRRTM4Q86VH4 BX255925.1-201ENST00000566954 1854 ntBASIC24.48■■□□□ 1.51
LRRTM4Q86VH4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRRTM4Q86VH4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
LRRTM4Q86VH4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRRTM4Q86VH4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LRRTM4Q86VH4 AC092296.2-201ENST00000589470 999 ntBASIC24.46■■□□□ 1.51
LRRTM4Q86VH4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.46■■□□□ 1.51
LRRTM4Q86VH4 WHAMMP3-201ENST00000611636 1609 ntBASIC24.46■■□□□ 1.51
LRRTM4Q86VH4 RARRES2P2-201ENST00000394842 485 ntBASIC24.45■■□□□ 1.5
LRRTM4Q86VH4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LRRTM4Q86VH4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LRRTM4Q86VH4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
LRRTM4Q86VH4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRTM4Q86VH4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LRRTM4Q86VH4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRTM4Q86VH4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRTM4Q86VH4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRTM4Q86VH4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.43■■□□□ 1.5
LRRTM4Q86VH4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
LRRTM4Q86VH4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.42■■□□□ 1.5
LRRTM4Q86VH4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRRTM4Q86VH4 AL157400.5-201ENST00000507624 621 ntBASIC24.42■■□□□ 1.5
LRRTM4Q86VH4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.42■■□□□ 1.5
LRRTM4Q86VH4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRRTM4Q86VH4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
LRRTM4Q86VH4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms