Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC018358.1-201ENST00000631079 1402 ntBASIC21.37■■□□□ 1.01
EFNB3Q15768 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.37■■□□□ 1.01
EFNB3Q15768 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFNB3Q15768 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFNB3Q15768 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
EFNB3Q15768 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.36■■□□□ 1.01
EFNB3Q15768 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFNB3Q15768 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.35■■□□□ 1.01
EFNB3Q15768 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EFNB3Q15768 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EFNB3Q15768 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFNB3Q15768 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EFNB3Q15768 AL359258.2-201ENST00000564063 1566 ntBASIC21.33■■□□□ 1.01
EFNB3Q15768 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFNB3Q15768 AL157400.5-201ENST00000507624 621 ntBASIC21.33■■□□□ 1.01
EFNB3Q15768 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.33■■□□□ 1.01
EFNB3Q15768 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EFNB3Q15768 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFNB3Q15768 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFNB3Q15768 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
EFNB3Q15768 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFNB3Q15768 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.31■■□□□ 1
EFNB3Q15768 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.31■■□□□ 1
EFNB3Q15768 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.31■■□□□ 1
EFNB3Q15768 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFNB3Q15768 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.3■■□□□ 1
EFNB3Q15768 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.3■■□□□ 1
EFNB3Q15768 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.3■■□□□ 1
EFNB3Q15768 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.29■■□□□ 1
EFNB3Q15768 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EFNB3Q15768 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFNB3Q15768 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EFNB3Q15768 NTF6A-201ENST00000591175 560 ntBASIC21.29■■□□□ 1
EFNB3Q15768 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
EFNB3Q15768 AC139426.1-201ENST00000568218 2529 ntBASIC21.28■■□□□ 1
EFNB3Q15768 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFNB3Q15768 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EFNB3Q15768 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
EFNB3Q15768 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
EFNB3Q15768 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFNB3Q15768 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.27■■□□□ 1
EFNB3Q15768 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.27■■□□□ 1
EFNB3Q15768 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.27■□□□□ 0.99
EFNB3Q15768 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
EFNB3Q15768 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFNB3Q15768 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EFNB3Q15768 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
EFNB3Q15768 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.26■□□□□ 0.99
EFNB3Q15768 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
EFNB3Q15768 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EFNB3Q15768 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
EFNB3Q15768 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.26■□□□□ 0.99
EFNB3Q15768 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFNB3Q15768 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EFNB3Q15768 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFNB3Q15768 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.24■□□□□ 0.99
EFNB3Q15768 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EFNB3Q15768 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFNB3Q15768 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFNB3Q15768 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.23■□□□□ 0.99
EFNB3Q15768 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.23■□□□□ 0.99
EFNB3Q15768 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFNB3Q15768 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.23■□□□□ 0.99
EFNB3Q15768 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
EFNB3Q15768 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
EFNB3Q15768 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
EFNB3Q15768 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFNB3Q15768 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.22■□□□□ 0.99
EFNB3Q15768 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EFNB3Q15768 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
EFNB3Q15768 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.22■□□□□ 0.99
EFNB3Q15768 AC007029.1-201ENST00000604183 313 ntBASIC21.21■□□□□ 0.99
EFNB3Q15768 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
EFNB3Q15768 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EFNB3Q15768 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
EFNB3Q15768 SMPD5-203ENST00000639008 1464 ntBASIC21.2■□□□□ 0.98
EFNB3Q15768 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
EFNB3Q15768 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EFNB3Q15768 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.2■□□□□ 0.98
EFNB3Q15768 U85056.1-201ENST00000616429 682 ntBASIC21.2■□□□□ 0.98
EFNB3Q15768 DRD5P2-201ENST00000421395 2012 ntBASIC21.19■□□□□ 0.98
EFNB3Q15768 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EFNB3Q15768 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
EFNB3Q15768 AC025884.2-201ENST00000553429 711 ntBASIC21.19■□□□□ 0.98
EFNB3Q15768 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.19■□□□□ 0.98
EFNB3Q15768 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.18■□□□□ 0.98
EFNB3Q15768 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.18■□□□□ 0.98
EFNB3Q15768 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB3Q15768 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.18■□□□□ 0.98
EFNB3Q15768 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB3Q15768 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB3Q15768 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB3Q15768 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB3Q15768 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
EFNB3Q15768 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EFNB3Q15768 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB3Q15768 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.17■□□□□ 0.98
EFNB3Q15768 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB3Q15768 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EFNB3Q15768 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms