Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
TTC3P53804 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.25■■□□□ 1.95
TTC3P53804 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TTC3P53804 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TTC3P53804 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TTC3P53804 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TTC3P53804 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TTC3P53804 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TTC3P53804 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.23■■□□□ 1.95
TTC3P53804 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.23■■□□□ 1.95
TTC3P53804 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
TTC3P53804 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.22■■□□□ 1.95
TTC3P53804 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.22■■□□□ 1.95
TTC3P53804 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TTC3P53804 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
TTC3P53804 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TTC3P53804 ABCB10P1-201ENST00000614297 2181 ntBASIC27.21■■□□□ 1.95
TTC3P53804 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TTC3P53804 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.21■■□□□ 1.95
TTC3P53804 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TTC3P53804 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.21■■□□□ 1.95
TTC3P53804 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.21■■□□□ 1.95
TTC3P53804 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
TTC3P53804 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.2■■□□□ 1.95
TTC3P53804 SMPD5-203ENST00000639008 1464 ntBASIC27.2■■□□□ 1.94
TTC3P53804 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TTC3P53804 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TTC3P53804 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
TTC3P53804 AL359258.2-201ENST00000564063 1566 ntBASIC27.18■■□□□ 1.94
TTC3P53804 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC3P53804 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.17■■□□□ 1.94
TTC3P53804 RAP2CP1-202ENST00000605179 643 ntBASIC27.17■■□□□ 1.94
TTC3P53804 AC093536.1-201ENST00000569153 554 ntBASIC27.16■■□□□ 1.94
TTC3P53804 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
TTC3P53804 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.16■■□□□ 1.94
TTC3P53804 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC3P53804 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC3P53804 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
TTC3P53804 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC3P53804 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
TTC3P53804 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
TTC3P53804 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TTC3P53804 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TTC3P53804 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
TTC3P53804 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
TTC3P53804 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
TTC3P53804 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TTC3P53804 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
TTC3P53804 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.13■■□□□ 1.93
TTC3P53804 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC3P53804 ABCB10P3-201ENST00000561950 2166 ntBASIC27.12■■□□□ 1.93
TTC3P53804 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC3P53804 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC3P53804 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.12■■□□□ 1.93
TTC3P53804 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC3P53804 DUX4L9-201ENST00000449051 1259 ntBASIC27.11■■□□□ 1.93
TTC3P53804 AC026202.3-201ENST00000600805 1127 ntBASIC27.11■■□□□ 1.93
TTC3P53804 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TTC3P53804 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC3P53804 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC3P53804 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC3P53804 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.09■■□□□ 1.93
TTC3P53804 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
TTC3P53804 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC3P53804 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC3P53804 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
TTC3P53804 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC3P53804 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC3P53804 AL139393.2-201ENST00000608721 2025 ntBASIC27.08■■□□□ 1.93
TTC3P53804 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC3P53804 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.08■■□□□ 1.93
TTC3P53804 DUX4L18-201ENST00000553347 1267 ntBASIC27.08■■□□□ 1.93
TTC3P53804 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.08■■□□□ 1.93
TTC3P53804 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.08■■□□□ 1.93
TTC3P53804 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
TTC3P53804 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC3P53804 AL451085.2-201ENST00000605085 799 ntBASIC27.07■■□□□ 1.92
TTC3P53804 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC3P53804 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC3P53804 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
TTC3P53804 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TTC3P53804 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.07■■□□□ 1.92
TTC3P53804 AP002414.2-202ENST00000590929 1450 ntBASIC27.07■■□□□ 1.92
TTC3P53804 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC3P53804 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
TTC3P53804 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.06■■□□□ 1.92
TTC3P53804 SPCS2P3-201ENST00000500401 656 ntBASIC27.06■■□□□ 1.92
TTC3P53804 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
TTC3P53804 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.04■■□□□ 1.92
TTC3P53804 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC3P53804 RP9P-202ENST00000450133 1212 ntBASIC27.04■■□□□ 1.92
TTC3P53804 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.04■■□□□ 1.92
TTC3P53804 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC3P53804 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC3P53804 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.03■■□□□ 1.92
TTC3P53804 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.02■■□□□ 1.92
TTC3P53804 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
TTC3P53804 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TTC3P53804 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.02■■□□□ 1.92
TTC3P53804 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms