Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDKN1AP38936 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.3■■□□□ 1
CDKN1AP38936 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN1AP38936 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDKN1AP38936 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN1AP38936 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN1AP38936 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDKN1AP38936 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN1AP38936 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.29■■□□□ 1
CDKN1AP38936 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN1AP38936 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.29■■□□□ 1
CDKN1AP38936 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.29■■□□□ 1
CDKN1AP38936 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKN1AP38936 ABCB10P3-201ENST00000561950 2166 ntBASIC21.29■■□□□ 1
CDKN1AP38936 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDKN1AP38936 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDKN1AP38936 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDKN1AP38936 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDKN1AP38936 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDKN1AP38936 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.28■■□□□ 1
CDKN1AP38936 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDKN1AP38936 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.27■■□□□ 1
CDKN1AP38936 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN1AP38936 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.27■■□□□ 1
CDKN1AP38936 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDKN1AP38936 AL139393.2-201ENST00000608721 2025 ntBASIC21.27■■□□□ 1
CDKN1AP38936 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDKN1AP38936 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN1AP38936 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDKN1AP38936 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN1AP38936 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CDKN1AP38936 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDKN1AP38936 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.26■□□□□ 0.99
CDKN1AP38936 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
CDKN1AP38936 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.26■□□□□ 0.99
CDKN1AP38936 AC133552.2-201ENST00000619106 1032 ntBASIC21.26■□□□□ 0.99
CDKN1AP38936 SMPD5-203ENST00000639008 1464 ntBASIC21.26■□□□□ 0.99
CDKN1AP38936 AL592293.1-201ENST00000502889 1188 ntBASIC21.25■□□□□ 0.99
CDKN1AP38936 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN1AP38936 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.25■□□□□ 0.99
CDKN1AP38936 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN1AP38936 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN1AP38936 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDKN1AP38936 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDKN1AP38936 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.25■□□□□ 0.99
CDKN1AP38936 AC009831.1-201ENST00000580420 1582 ntBASIC21.24■□□□□ 0.99
CDKN1AP38936 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.24■□□□□ 0.99
CDKN1AP38936 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN1AP38936 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.24■□□□□ 0.99
CDKN1AP38936 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDKN1AP38936 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN1AP38936 DUX4L18-201ENST00000553347 1267 ntBASIC21.23■□□□□ 0.99
CDKN1AP38936 AC129492.7-201ENST00000622992 756 ntBASIC21.23■□□□□ 0.99
CDKN1AP38936 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKN1AP38936 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.23■□□□□ 0.99
CDKN1AP38936 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN1AP38936 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN1AP38936 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.22■□□□□ 0.99
CDKN1AP38936 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKN1AP38936 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN1AP38936 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN1AP38936 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKN1AP38936 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CDKN1AP38936 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKN1AP38936 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDKN1AP38936 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN1AP38936 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKN1AP38936 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDKN1AP38936 RARRES2P1-201ENST00000474487 481 ntBASIC21.2■□□□□ 0.98
CDKN1AP38936 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDKN1AP38936 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN1AP38936 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.19■□□□□ 0.98
CDKN1AP38936 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN1AP38936 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKN1AP38936 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN1AP38936 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.18■□□□□ 0.98
CDKN1AP38936 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKN1AP38936 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKN1AP38936 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN1AP38936 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDKN1AP38936 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDKN1AP38936 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.17■□□□□ 0.98
CDKN1AP38936 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.16■□□□□ 0.98
CDKN1AP38936 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN1AP38936 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN1AP38936 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDKN1AP38936 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDKN1AP38936 AC026202.3-201ENST00000600805 1127 ntBASIC21.16■□□□□ 0.98
CDKN1AP38936 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.16■□□□□ 0.98
CDKN1AP38936 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.16■□□□□ 0.98
CDKN1AP38936 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDKN1AP38936 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDKN1AP38936 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKN1AP38936 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDKN1AP38936 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.15■□□□□ 0.98
CDKN1AP38936 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKN1AP38936 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDKN1AP38936 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDKN1AP38936 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
CDKN1AP38936 AC025884.2-201ENST00000553429 711 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms