Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP3CBP16298 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP3CBP16298 AC022413.1-201ENST00000624602 984 ntBASIC22.21■■□□□ 1.15
PPP3CBP16298 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP3CBP16298 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP3CBP16298 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.2■■□□□ 1.14
PPP3CBP16298 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP3CBP16298 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.2■■□□□ 1.14
PPP3CBP16298 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP3CBP16298 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.2■■□□□ 1.14
PPP3CBP16298 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP3CBP16298 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.19■■□□□ 1.14
PPP3CBP16298 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PPP3CBP16298 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP3CBP16298 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PPP3CBP16298 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PPP3CBP16298 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
PPP3CBP16298 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PPP3CBP16298 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.18■■□□□ 1.14
PPP3CBP16298 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP3CBP16298 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
PPP3CBP16298 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PPP3CBP16298 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP3CBP16298 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP3CBP16298 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP3CBP16298 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP3CBP16298 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PPP3CBP16298 AL121749.1-202ENST00000609313 2153 ntBASIC22.16■■□□□ 1.14
PPP3CBP16298 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PPP3CBP16298 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PPP3CBP16298 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.15■■□□□ 1.14
PPP3CBP16298 ABHD17AP5-201ENST00000580133 923 ntBASIC22.15■■□□□ 1.14
PPP3CBP16298 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP3CBP16298 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP3CBP16298 MIR219A2-201ENST00000608502 1504 ntBASIC22.14■■□□□ 1.13
PPP3CBP16298 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP3CBP16298 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.13■■□□□ 1.13
PPP3CBP16298 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP3CBP16298 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP3CBP16298 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP3CBP16298 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.13■■□□□ 1.13
PPP3CBP16298 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PPP3CBP16298 AC126177.7-201ENST00000547904 679 ntBASIC22.12■■□□□ 1.13
PPP3CBP16298 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP3CBP16298 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PPP3CBP16298 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PPP3CBP16298 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP3CBP16298 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP3CBP16298 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.1■■□□□ 1.13
PPP3CBP16298 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP3CBP16298 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP3CBP16298 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PPP3CBP16298 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PPP3CBP16298 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP3CBP16298 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP3CBP16298 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP3CBP16298 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.09■■□□□ 1.13
PPP3CBP16298 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP3CBP16298 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP3CBP16298 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP3CBP16298 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
PPP3CBP16298 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP3CBP16298 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP3CBP16298 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PPP3CBP16298 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.08■■□□□ 1.13
PPP3CBP16298 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP3CBP16298 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.07■■□□□ 1.12
PPP3CBP16298 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.07■■□□□ 1.12
PPP3CBP16298 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PPP3CBP16298 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PPP3CBP16298 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PPP3CBP16298 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP3CBP16298 AC060814.1-201ENST00000554326 538 ntBASIC22.06■■□□□ 1.12
PPP3CBP16298 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP3CBP16298 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP3CBP16298 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP3CBP16298 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
PPP3CBP16298 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PPP3CBP16298 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPP3CBP16298 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.04■■□□□ 1.12
PPP3CBP16298 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.04■■□□□ 1.12
PPP3CBP16298 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PPP3CBP16298 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP3CBP16298 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP3CBP16298 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP3CBP16298 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP3CBP16298 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.02■■□□□ 1.12
PPP3CBP16298 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP3CBP16298 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP3CBP16298 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
PPP3CBP16298 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP3CBP16298 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP3CBP16298 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP3CBP16298 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP3CBP16298 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22■■□□□ 1.11
PPP3CBP16298 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PPP3CBP16298 AC100797.4-201ENST00000631653 1827 ntBASIC22■■□□□ 1.11
PPP3CBP16298 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22■■□□□ 1.11
PPP3CBP16298 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PPP3CBP16298 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms