Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.31■□□□□ 0.84
LINC00473A8K010 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.31■□□□□ 0.84
LINC00473A8K010 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00473A8K010 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00473A8K010 AL449106.1-201ENST00000608517 1980 ntBASIC20.3■□□□□ 0.84
LINC00473A8K010 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00473A8K010 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00473A8K010 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00473A8K010 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00473A8K010 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00473A8K010 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC00473A8K010 AC091060.1-201ENST00000623524 1766 ntBASIC20.29■□□□□ 0.84
LINC00473A8K010 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00473A8K010 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00473A8K010 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00473A8K010 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00473A8K010 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00473A8K010 DUX4L29-201ENST00000425409 679 ntBASIC20.28■□□□□ 0.84
LINC00473A8K010 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.26■□□□□ 0.83
LINC00473A8K010 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00473A8K010 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LINC00473A8K010 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00473A8K010 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00473A8K010 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.25■□□□□ 0.83
LINC00473A8K010 AP004609.3-201ENST00000610705 1884 ntBASIC20.24■□□□□ 0.83
LINC00473A8K010 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00473A8K010 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.24■□□□□ 0.83
LINC00473A8K010 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00473A8K010 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC00473A8K010 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LINC00473A8K010 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00473A8K010 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.23■□□□□ 0.83
LINC00473A8K010 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00473A8K010 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00473A8K010 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LINC00473A8K010 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00473A8K010 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LINC00473A8K010 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00473A8K010 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00473A8K010 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00473A8K010 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC00473A8K010 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00473A8K010 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00473A8K010 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00473A8K010 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00473A8K010 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LINC00473A8K010 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00473A8K010 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00473A8K010 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00473A8K010 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00473A8K010 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.19■□□□□ 0.82
LINC00473A8K010 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00473A8K010 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00473A8K010 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00473A8K010 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00473A8K010 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00473A8K010 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00473A8K010 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00473A8K010 AC145676.1-201ENST00000514988 2004 ntBASIC20.17■□□□□ 0.82
LINC00473A8K010 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC00473A8K010 WHAMMP3-201ENST00000611636 1609 ntBASIC20.17■□□□□ 0.82
LINC00473A8K010 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC00473A8K010 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00473A8K010 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00473A8K010 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
LINC00473A8K010 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00473A8K010 RPS2P35-201ENST00000443417 897 ntBASIC20.16■□□□□ 0.82
LINC00473A8K010 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.16■□□□□ 0.82
LINC00473A8K010 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00473A8K010 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.16■□□□□ 0.82
LINC00473A8K010 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00473A8K010 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC00473A8K010 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.15■□□□□ 0.82
LINC00473A8K010 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00473A8K010 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00473A8K010 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00473A8K010 AC142472.1-201ENST00000612013 1741 ntBASIC20.14■□□□□ 0.81
LINC00473A8K010 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00473A8K010 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00473A8K010 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00473A8K010 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00473A8K010 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00473A8K010 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00473A8K010 AC092803.2-201ENST00000564287 1899 ntBASIC20.12■□□□□ 0.81
LINC00473A8K010 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00473A8K010 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.12■□□□□ 0.81
LINC00473A8K010 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LINC00473A8K010 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00473A8K010 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00473A8K010 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00473A8K010 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00473A8K010 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00473A8K010 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00473A8K010 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LINC00473A8K010 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00473A8K010 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LINC00473A8K010 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00473A8K010 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.1■□□□□ 0.81
LINC00473A8K010 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.1■□□□□ 0.81
LINC00473A8K010 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms