Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC9.51□□□□□ -0.892e-11■■□□□ 11.4
SUB1P53999 RBM4-207ENST00000506523 654 ntTSL 3 BASIC9.51□□□□□ -0.892e-11■■□□□ 11.4
SUB1P53999 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC9.33□□□□□ -0.922e-11■■□□□ 11.4
SUB1P53999 RBMX-206ENST00000561733 837 ntTSL 37.99□□□□□ -1.136e-9■■□□□ 11.4
SUB1P53999 RBM4-210ENST00000528039 764 ntTSL 37.75□□□□□ -1.172e-11■■□□□ 11.4
SUB1P53999 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.11□□□□□ -1.432e-11■■□□□ 11.4
SUB1P53999 UQCR10-202ENST00000401406 584 ntTSL 1 (best) BASIC7.52□□□□□ -1.219e-9■■□□□ 11.4
SUB1P53999 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.689e-9■■□□□ 11.4
SUB1P53999 HNRNPK-211ENST00000493362 868 ntTSL 24.13□□□□□ -1.752e-8■■□□□ 11.4
SUB1P53999 FUS-211ENST00000568901 521 ntTSL 27.26□□□□□ -1.251e-9■■□□□ 11.4
SUB1P53999 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.87□□□□□ -0.351e-6■■□□□ 11.4
SUB1P53999 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.076e-10■■□□□ 11.4
SUB1P53999 HBG2-202ENST00000380252 694 ntTSL 3 BASIC7.94□□□□□ -1.146e-10■■□□□ 11.4
SUB1P53999 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.246e-10■■□□□ 11.4
SUB1P53999 FLNA-215ENST00000474358 696 ntTSL 213.03□□□□□ -0.321e-8■■□□□ 11.4
SUB1P53999 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.382e-6■□□□□ 11.3
SUB1P53999 MFSD2B-204ENST00000469562 2613 ntTSL 1 (best)12.48□□□□□ -0.412e-6■□□□□ 11.3
SUB1P53999 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.62e-6■□□□□ 11.3
SUB1P53999 MFSD2B-205ENST00000495018 1156 ntTSL 1 (best)10.24□□□□□ -0.772e-6■□□□□ 11.3
SUB1P53999 RASSF1-207ENST00000482447 1711 ntTSL 1 (best)17.23■□□□□ 0.356e-7■□□□□ 11.3
SUB1P53999 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.276e-7■□□□□ 11.3
SUB1P53999 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.16e-7■□□□□ 11.3
SUB1P53999 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.16■□□□□ 0.026e-7■□□□□ 11.3
SUB1P53999 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.75□□□□□ -0.056e-7■□□□□ 11.3
SUB1P53999 RASSF1-204ENST00000395117 1745 ntTSL 214.38□□□□□ -0.116e-7■□□□□ 11.3
SUB1P53999 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.88□□□□□ -0.356e-7■□□□□ 11.3
SUB1P53999 SLC6A8-209ENST00000476466 470 ntTSL 310.42□□□□□ -0.748e-7■□□□□ 11.3
SUB1P53999 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.153e-16■□□□□ 11.3
SUB1P53999 SRSF4-208ENST00000634348 8128 ntTSL 510.51□□□□□ -0.733e-16■□□□□ 11.3
SUB1P53999 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.867e-7■□□□□ 11.3
SUB1P53999 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.037e-7■□□□□ 11.3
SUB1P53999 FLNA-208ENST00000438732 696 ntTSL 512.98□□□□□ -0.332e-6■□□□□ 11.3
SUB1P53999 PPP1CC-209ENST00000551690 603 ntTSL 315.12■□□□□ 0.012e-12■□□□□ 11.3
SUB1P53999 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)15.29■□□□□ 0.043e-16■□□□□ 11.3
SUB1P53999 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.453e-16■□□□□ 11.3
SUB1P53999 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.322e-7■□□□□ 11.3
SUB1P53999 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)12.58□□□□□ -0.42e-7■□□□□ 11.3
SUB1P53999 ADAMTSL4-205ENST00000483335 1826 ntTSL 1 (best)12.38□□□□□ -0.432e-7■□□□□ 11.3
SUB1P53999 KIAA0907-210ENST00000491599 773 ntTSL 312.33□□□□□ -0.442e-7■□□□□ 11.3
SUB1P53999 PLK1-204ENST00000564202 584 ntTSL 312.18□□□□□ -0.462e-7■□□□□ 11.3
SUB1P53999 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.532e-7■□□□□ 11.3
SUB1P53999 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.74□□□□□ -0.532e-7■□□□□ 11.3
SUB1P53999 PLK1-209ENST00000570220 910 ntTSL 311.65□□□□□ -0.542e-7■□□□□ 11.3
SUB1P53999 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.51□□□□□ -0.572e-7■□□□□ 11.3
SUB1P53999 KIAA0907-206ENST00000466713 911 ntTSL 1 (best)11.47□□□□□ -0.572e-7■□□□□ 11.3
SUB1P53999 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC10.94□□□□□ -0.662e-7■□□□□ 11.3
SUB1P53999 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.672e-7■□□□□ 11.3
SUB1P53999 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC10.08□□□□□ -0.82e-7■□□□□ 11.3
SUB1P53999 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC10.05□□□□□ -0.82e-7■□□□□ 11.3
SUB1P53999 ERI3-204ENST00000456170 1103 ntTSL 59.74□□□□□ -0.852e-7■□□□□ 11.3
SUB1P53999 AC024293.1-201ENST00000467930 498 ntBASIC9.74□□□□□ -0.852e-7■□□□□ 11.3
SUB1P53999 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC9.69□□□□□ -0.862e-7■□□□□ 11.3
SUB1P53999 KIAA0907-202ENST00000368320 4499 ntTSL 1 (best) BASIC9.65□□□□□ -0.872e-7■□□□□ 11.3
SUB1P53999 KIAA0907-203ENST00000368321 2947 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.972e-7■□□□□ 11.3
SUB1P53999 AP2M1-213ENST00000463935 580 ntTSL 28.62□□□□□ -1.032e-7■□□□□ 11.3
SUB1P53999 ERI3-202ENST00000372259 1332 ntTSL 5 BASIC7.81□□□□□ -1.162e-7■□□□□ 11.3
SUB1P53999 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC7.52□□□□□ -1.212e-7■□□□□ 11.3
SUB1P53999 AP2M1-218ENST00000480260 582 ntTSL 27.52□□□□□ -1.212e-7■□□□□ 11.3
SUB1P53999 ERI3-208ENST00000489710 394 ntTSL 37.5□□□□□ -1.212e-7■□□□□ 11.3
SUB1P53999 KIAA0907-208ENST00000482337 1135 ntTSL 1 (best)6.7□□□□□ -1.342e-7■□□□□ 11.3
SUB1P53999 AP2M1-208ENST00000442686 673 ntTSL 26.21□□□□□ -1.422e-7■□□□□ 11.3
SUB1P53999 AP2M1-217ENST00000476434 321 ntTSL 24.88□□□□□ -1.632e-7■□□□□ 11.3
SUB1P53999 CLTC-205ENST00000472651 665 ntTSL 23.83□□□□□ -1.82e-7■□□□□ 11.3
SUB1P53999 UBR4-207ENST00000425413 2954 ntTSL 29.28□□□□□ -0.925e-7■□□□□ 11.2
SUB1P53999 ATP6V0B-208ENST00000473485 1664 ntTSL 217.91■□□□□ 0.461e-7■□□□□ 11.2
SUB1P53999 ATP6V0B-203ENST00000468183 2432 ntTSL 1 (best)17.83■□□□□ 0.451e-7■□□□□ 11.2
SUB1P53999 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-7■□□□□ 11.2
SUB1P53999 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.02□□□□□ -0.011e-7■□□□□ 11.2
SUB1P53999 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.69□□□□□ -0.71e-7■□□□□ 11.2
SUB1P53999 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.69□□□□□ -0.71e-7■□□□□ 11.2
SUB1P53999 RPS4X-202ENST00000373626 594 ntTSL 36.78□□□□□ -1.322e-6■□□□□ 11.2
SUB1P53999 NPEPPS-216ENST00000530514 2092 ntTSL 27.01□□□□□ -1.292e-7■□□□□ 11.2
SUB1P53999 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.13■□□□□ 0.011e-12■□□□□ 11.2
SUB1P53999 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.91□□□□□ -0.341e-12■□□□□ 11.2
SUB1P53999 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.352e-7■□□□□ 11.2
SUB1P53999 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.77■□□□□ 0.762e-7■□□□□ 11.2
SUB1P53999 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.192e-14■□□□□ 11.2
SUB1P53999 LMO2-203ENST00000411482 1519 ntTSL 1 (best)15.45■□□□□ 0.062e-7■□□□□ 11.2
SUB1P53999 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.22■□□□□ 0.032e-7■□□□□ 11.2
SUB1P53999 LMO2-204ENST00000464025 1550 ntTSL 1 (best)14.11□□□□□ -0.152e-7■□□□□ 11.2
SUB1P53999 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.292e-7■□□□□ 11.2
SUB1P53999 PSMD4-205ENST00000445776 703 ntTSL 312.38□□□□□ -0.432e-7■□□□□ 11.2
SUB1P53999 AC004922.1-202ENST00000441989 1702 ntTSL 212.28□□□□□ -0.442e-7■□□□□ 11.2
SUB1P53999 PSMD4-212ENST00000491857 461 ntTSL 212.2□□□□□ -0.462e-7■□□□□ 11.2
SUB1P53999 DDX27-204ENST00000484427 4929 ntTSL 1 (best)12.04□□□□□ -0.482e-7■□□□□ 11.2
SUB1P53999 ARPC1A-202ENST00000432786 1516 ntTSL 511.45□□□□□ -0.582e-7■□□□□ 11.2
SUB1P53999 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.662e-7■□□□□ 11.2
SUB1P53999 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.672e-7■□□□□ 11.2
SUB1P53999 SUMF2-212ENST00000447501 1249 ntTSL 210.86□□□□□ -0.672e-7■□□□□ 11.2
SUB1P53999 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.827e-7■□□□□ 11.2
SUB1P53999 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.852e-7■□□□□ 11.2
SUB1P53999 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC9.58□□□□□ -0.882e-7■□□□□ 11.2
SUB1P53999 SF3B3-202ENST00000562722 881 ntTSL 29.47□□□□□ -0.892e-7■□□□□ 11.2
SUB1P53999 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.942e-7■□□□□ 11.2
SUB1P53999 ARPC1A-203ENST00000463009 719 ntTSL 38.48□□□□□ -1.052e-7■□□□□ 11.2
SUB1P53999 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.072e-7■□□□□ 11.2
SUB1P53999 CD47-204ENST00000471694 6796 ntTSL 1 (best)7.93□□□□□ -1.142e-7■□□□□ 11.2
SUB1P53999 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.232e-14■□□□□ 11.2
SUB1P53999 SF3B3-204ENST00000563739 1105 ntTSL 27.16□□□□□ -1.262e-7■□□□□ 11.2
SUB1P53999 ARPC1A-205ENST00000477240 541 ntTSL 26.72□□□□□ -1.332e-7■□□□□ 11.2
Retrieved 100 of 11,644 protein–RNA pairs in 440.8 ms