RNA–Protein interactions for RNA: ENST00000489710.1

ERI3-208, Transcript of ERI1 exoribonuclease family member 3, humanhuman

TSL 3

Gene ERI3, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3-208ENST00000489710 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
ERI3-208ENST00000489710 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
ERI3-208ENST00000489710 ABCC9O60706 1549 aa20.48■□□□□ 0.87
ERI3-208ENST00000489710 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
ERI3-208ENST00000489710 NACADO15069 1562 aa19.76■□□□□ 0.75
ERI3-208ENST00000489710 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
ERI3-208ENST00000489710 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
ERI3-208ENST00000489710 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
ERI3-208ENST00000489710 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
ERI3-208ENST00000489710 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
ERI3-208ENST00000489710 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
ERI3-208ENST00000489710 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.65
ERI3-208ENST00000489710 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
ERI3-208ENST00000489710 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
ERI3-208ENST00000489710 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
ERI3-208ENST00000489710 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
ERI3-208ENST00000489710 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
ERI3-208ENST00000489710 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
ERI3-208ENST00000489710 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
ERI3-208ENST00000489710 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
ERI3-208ENST00000489710 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
ERI3-208ENST00000489710 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
ERI3-208ENST00000489710 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
ERI3-208ENST00000489710 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
ERI3-208ENST00000489710 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
ERI3-208ENST00000489710 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
ERI3-208ENST00000489710 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
ERI3-208ENST00000489710 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
ERI3-208ENST00000489710 WIZO95785 1651 aa18.02■□□□□ 0.47
ERI3-208ENST00000489710 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
ERI3-208ENST00000489710 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
ERI3-208ENST00000489710 NESP48681 1621 aa17.72■□□□□ 0.43
ERI3-208ENST00000489710 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
ERI3-208ENST00000489710 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
ERI3-208ENST00000489710 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
ERI3-208ENST00000489710 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
ERI3-208ENST00000489710 CFTRP13569 1480 aa17.59■□□□□ 0.41
ERI3-208ENST00000489710 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
ERI3-208ENST00000489710 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
ERI3-208ENST00000489710 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
ERI3-208ENST00000489710 CUX2O14529 1486 aa17.48■□□□□ 0.39
ERI3-208ENST00000489710 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
ERI3-208ENST00000489710 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
ERI3-208ENST00000489710 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
ERI3-208ENST00000489710 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
ERI3-208ENST00000489710 WDR62O43379 1518 aa17.37■□□□□ 0.37
ERI3-208ENST00000489710 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
ERI3-208ENST00000489710 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
ERI3-208ENST00000489710 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
ERI3-208ENST00000489710 TOPBP1Q92547 1522 aa17.21■□□□□ 0.34
ERI3-208ENST00000489710 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
ERI3-208ENST00000489710 CUX1P39880 1505 aa17.09■□□□□ 0.33
ERI3-208ENST00000489710 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
ERI3-208ENST00000489710 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
ERI3-208ENST00000489710 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
ERI3-208ENST00000489710 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
ERI3-208ENST00000489710 SOGA1O94964 1423 aa16.99■□□□□ 0.31
ERI3-208ENST00000489710 ZNF608Q9ULD9 1512 aaPredicted RBP16.98■□□□□ 0.31
ERI3-208ENST00000489710 TOP2BQ02880 1626 aa16.98■□□□□ 0.31
ERI3-208ENST00000489710 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
ERI3-208ENST00000489710 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
ERI3-208ENST00000489710 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
ERI3-208ENST00000489710 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
ERI3-208ENST00000489710 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
ERI3-208ENST00000489710 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
ERI3-208ENST00000489710 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
ERI3-208ENST00000489710 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
ERI3-208ENST00000489710 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
ERI3-208ENST00000489710 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
ERI3-208ENST00000489710 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
ERI3-208ENST00000489710 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
ERI3-208ENST00000489710 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
ERI3-208ENST00000489710 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
ERI3-208ENST00000489710 MAGI1Q96QZ7 1491 aaPredicted RBP16.76■□□□□ 0.27
ERI3-208ENST00000489710 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
ERI3-208ENST00000489710 CHD1O14646 1710 aa16.72■□□□□ 0.27
ERI3-208ENST00000489710 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
ERI3-208ENST00000489710 SYNJ2O15056 1496 aa16.68■□□□□ 0.26
ERI3-208ENST00000489710 FBLN2P98095 1184 aa16.68■□□□□ 0.26
ERI3-208ENST00000489710 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
ERI3-208ENST00000489710 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
ERI3-208ENST00000489710 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
ERI3-208ENST00000489710 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
ERI3-208ENST00000489710 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
ERI3-208ENST00000489710 GRIN2AQ12879 1464 aa16.58■□□□□ 0.24
ERI3-208ENST00000489710 CUL7Q14999 1698 aa16.56■□□□□ 0.24
ERI3-208ENST00000489710 IGF1RP08069 1367 aa16.55■□□□□ 0.24
ERI3-208ENST00000489710 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
ERI3-208ENST00000489710 NUP160Q12769 1436 aa16.5■□□□□ 0.23
ERI3-208ENST00000489710 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
ERI3-208ENST00000489710 ARHGEF11O15085 1522 aa16.47■□□□□ 0.23
ERI3-208ENST00000489710 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
ERI3-208ENST00000489710 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
ERI3-208ENST00000489710 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
ERI3-208ENST00000489710 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
ERI3-208ENST00000489710 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
ERI3-208ENST00000489710 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
ERI3-208ENST00000489710 EEA1Q15075 1411 aa16.39■□□□□ 0.21
ERI3-208ENST00000489710 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
ERI3-208ENST00000489710 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms