RNA–Protein interactions for RNA: ENST00000338315.5

MFSD2B-201, Transcript of major facilitator superfamily domain containing 2B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MFSD2B, Length 2,850 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD2B-201ENST00000338315 NISCHQ9Y2I1 1504 aa29.26■■■□□ 2.27
MFSD2B-201ENST00000338315 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
MFSD2B-201ENST00000338315 CCDC180Q9P1Z9 1646 aa25.2■■□□□ 1.63
MFSD2B-201ENST00000338315 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
MFSD2B-201ENST00000338315 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
MFSD2B-201ENST00000338315 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.51
MFSD2B-201ENST00000338315 ABCC9O60706 1549 aa24.49■■□□□ 1.51
MFSD2B-201ENST00000338315 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.42
MFSD2B-201ENST00000338315 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
MFSD2B-201ENST00000338315 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
MFSD2B-201ENST00000338315 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
MFSD2B-201ENST00000338315 SCRIBQ14160 1630 aa23.64■■□□□ 1.38
MFSD2B-201ENST00000338315 NACADO15069 1562 aa23.62■■□□□ 1.37
MFSD2B-201ENST00000338315 LOC105371045A0A1W2PR82 267 aa23.54■■□□□ 1.36
MFSD2B-201ENST00000338315 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
MFSD2B-201ENST00000338315 PPARGC1BQ86YN6 1023 aaKnown RBP23.42■■□□□ 1.34
MFSD2B-201ENST00000338315 HRCP23327 699 aa23.35■■□□□ 1.33
MFSD2B-201ENST00000338315 EHMT2Q96KQ7 1210 aa23.34■■□□□ 1.33
MFSD2B-201ENST00000338315 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
MFSD2B-201ENST00000338315 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.29
MFSD2B-201ENST00000338315 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
MFSD2B-201ENST00000338315 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
MFSD2B-201ENST00000338315 BICRAQ9NZM4 1560 aa22.85■■□□□ 1.25
MFSD2B-201ENST00000338315 TRIM41Q8WV44 630 aa22.83■■□□□ 1.24
MFSD2B-201ENST00000338315 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
MFSD2B-201ENST00000338315 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
MFSD2B-201ENST00000338315 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
MFSD2B-201ENST00000338315 WIZO95785 1651 aa22.54■■□□□ 1.2
MFSD2B-201ENST00000338315 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
MFSD2B-201ENST00000338315 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
MFSD2B-201ENST00000338315 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
MFSD2B-201ENST00000338315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
MFSD2B-201ENST00000338315 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.15
MFSD2B-201ENST00000338315 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
MFSD2B-201ENST00000338315 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
MFSD2B-201ENST00000338315 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
MFSD2B-201ENST00000338315 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
MFSD2B-201ENST00000338315 SMARCA2P51531 1590 aa22.03■■□□□ 1.12
MFSD2B-201ENST00000338315 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
MFSD2B-201ENST00000338315 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
MFSD2B-201ENST00000338315 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
MFSD2B-201ENST00000338315 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
MFSD2B-201ENST00000338315 RANGAP1P46060 587 aaPredicted RBP21.91■■□□□ 1.1
MFSD2B-201ENST00000338315 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
MFSD2B-201ENST00000338315 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
MFSD2B-201ENST00000338315 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
MFSD2B-201ENST00000338315 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
MFSD2B-201ENST00000338315 UBTFP17480 764 aaKnown RBP21.85■■□□□ 1.09
MFSD2B-201ENST00000338315 SOGA1O94964 1423 aa21.76■■□□□ 1.07
MFSD2B-201ENST00000338315 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
MFSD2B-201ENST00000338315 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
MFSD2B-201ENST00000338315 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
MFSD2B-201ENST00000338315 CEP162Q5TB80 1403 aa21.6■■□□□ 1.05
MFSD2B-201ENST00000338315 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
MFSD2B-201ENST00000338315 NEUROD1Q13562 356 aa21.58■■□□□ 1.05
MFSD2B-201ENST00000338315 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.05
MFSD2B-201ENST00000338315 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
MFSD2B-201ENST00000338315 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
MFSD2B-201ENST00000338315 NESP48681 1621 aa21.48■■□□□ 1.03
MFSD2B-201ENST00000338315 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
MFSD2B-201ENST00000338315 CFTRP13569 1480 aa21.46■■□□□ 1.03
MFSD2B-201ENST00000338315 ACIN1Q9UKV3 1341 aaKnown RBP21.41■■□□□ 1.02
MFSD2B-201ENST00000338315 GTF3C3Q9Y5Q9 886 aa21.4■■□□□ 1.02
MFSD2B-201ENST00000338315 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
MFSD2B-201ENST00000338315 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
MFSD2B-201ENST00000338315 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
MFSD2B-201ENST00000338315 APLP2Q06481 763 aa21.26■□□□□ 0.99
MFSD2B-201ENST00000338315 CUX1P39880 1505 aa21.22■□□□□ 0.99
MFSD2B-201ENST00000338315 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
MFSD2B-201ENST00000338315 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
MFSD2B-201ENST00000338315 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
MFSD2B-201ENST00000338315 MIER1Q8N108 512 aa21.19■□□□□ 0.98
MFSD2B-201ENST00000338315 CLIP1P30622 1438 aa21.17■□□□□ 0.98
MFSD2B-201ENST00000338315 ITGAEP38570 1179 aa21.15■□□□□ 0.98
MFSD2B-201ENST00000338315 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
MFSD2B-201ENST00000338315 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
MFSD2B-201ENST00000338315 LAMC3Q9Y6N6 1575 aa21.09■□□□□ 0.97
MFSD2B-201ENST00000338315 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
MFSD2B-201ENST00000338315 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
MFSD2B-201ENST00000338315 EEA1Q15075 1411 aa21.06■□□□□ 0.96
MFSD2B-201ENST00000338315 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
MFSD2B-201ENST00000338315 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
MFSD2B-201ENST00000338315 KANK4Q5T7N3 995 aaPredicted RBP21.02■□□□□ 0.96
MFSD2B-201ENST00000338315 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
MFSD2B-201ENST00000338315 RAD54L2Q9Y4B4 1467 aa21■□□□□ 0.95
MFSD2B-201ENST00000338315 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
MFSD2B-201ENST00000338315 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
MFSD2B-201ENST00000338315 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
MFSD2B-201ENST00000338315 KIF21AQ7Z4S6 1674 aa20.97■□□□□ 0.95
MFSD2B-201ENST00000338315 CUX2O14529 1486 aa20.96■□□□□ 0.95
MFSD2B-201ENST00000338315 VPS8Q8N3P4 1428 aa20.94■□□□□ 0.94
MFSD2B-201ENST00000338315 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
MFSD2B-201ENST00000338315 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
MFSD2B-201ENST00000338315 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
MFSD2B-201ENST00000338315 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
MFSD2B-201ENST00000338315 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
MFSD2B-201ENST00000338315 ATP1B4Q9UN42 357 aaPredicted RBP20.88■□□□□ 0.93
MFSD2B-201ENST00000338315 KIF21BO75037 1637 aa20.85■□□□□ 0.93
MFSD2B-201ENST00000338315 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
MFSD2B-201ENST00000338315 IGF1RP08069 1367 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms