RNA–Protein interactions for RNA: ENST00000530235.1

RBM4-211, Transcript of RNA binding motif protein 4, humanhuman

TSL 3 BASIC

Gene RBM4, Length 1,011 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-211ENST00000530235 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
RBM4-211ENST00000530235 ABCC9O60706 1549 aa29.81■■■□□ 2.36
RBM4-211ENST00000530235 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
RBM4-211ENST00000530235 DNAJC5BQ9UF47 199 aa28.31■■■□□ 2.12
RBM4-211ENST00000530235 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
RBM4-211ENST00000530235 NACADO15069 1562 aa27.75■■■□□ 2.03
RBM4-211ENST00000530235 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
RBM4-211ENST00000530235 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
RBM4-211ENST00000530235 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
RBM4-211ENST00000530235 BICRAQ9NZM4 1560 aa27.29■■□□□ 1.96
RBM4-211ENST00000530235 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
RBM4-211ENST00000530235 CC2D2AQ9P2K1 1620 aa26.88■■□□□ 1.89
RBM4-211ENST00000530235 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
RBM4-211ENST00000530235 SHROOM4Q9ULL8 1493 aa26.79■■□□□ 1.88
RBM4-211ENST00000530235 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
RBM4-211ENST00000530235 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.87
RBM4-211ENST00000530235 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
RBM4-211ENST00000530235 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
RBM4-211ENST00000530235 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
RBM4-211ENST00000530235 CUX2O14529 1486 aa25.81■■□□□ 1.72
RBM4-211ENST00000530235 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
RBM4-211ENST00000530235 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
RBM4-211ENST00000530235 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
RBM4-211ENST00000530235 NESP48681 1621 aa25.46■■□□□ 1.67
RBM4-211ENST00000530235 SMARCA2P51531 1590 aa25.41■■□□□ 1.66
RBM4-211ENST00000530235 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
RBM4-211ENST00000530235 SMARCA4P51532 1647 aa25.39■■□□□ 1.66
RBM4-211ENST00000530235 THOC2Q8NI27 1593 aaKnown RBP25.29■■□□□ 1.64
RBM4-211ENST00000530235 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
RBM4-211ENST00000530235 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
RBM4-211ENST00000530235 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
RBM4-211ENST00000530235 LAMC3Q9Y6N6 1575 aa25.15■■□□□ 1.62
RBM4-211ENST00000530235 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
RBM4-211ENST00000530235 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
RBM4-211ENST00000530235 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
RBM4-211ENST00000530235 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
RBM4-211ENST00000530235 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
RBM4-211ENST00000530235 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
RBM4-211ENST00000530235 WDR62O43379 1518 aa24.79■■□□□ 1.56
RBM4-211ENST00000530235 WIZO95785 1651 aa24.69■■□□□ 1.54
RBM4-211ENST00000530235 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
RBM4-211ENST00000530235 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
RBM4-211ENST00000530235 OSCARQ8IYS5 282 aa24.55■■□□□ 1.52
RBM4-211ENST00000530235 CFTRP13569 1480 aa24.42■■□□□ 1.5
RBM4-211ENST00000530235 URB2Q14146 1524 aaKnown RBP24.41■■□□□ 1.5
RBM4-211ENST00000530235 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
RBM4-211ENST00000530235 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
RBM4-211ENST00000530235 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
RBM4-211ENST00000530235 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
RBM4-211ENST00000530235 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
RBM4-211ENST00000530235 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
RBM4-211ENST00000530235 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
RBM4-211ENST00000530235 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
RBM4-211ENST00000530235 IFT140Q96RY7 1462 aa24.16■■□□□ 1.46
RBM4-211ENST00000530235 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
RBM4-211ENST00000530235 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
RBM4-211ENST00000530235 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
RBM4-211ENST00000530235 CHD1O14646 1710 aa24.05■■□□□ 1.44
RBM4-211ENST00000530235 TRHP20396 242 aaPredicted RBP24.02■■□□□ 1.44
RBM4-211ENST00000530235 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
RBM4-211ENST00000530235 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.42
RBM4-211ENST00000530235 FBLN2P98095 1184 aa23.94■■□□□ 1.42
RBM4-211ENST00000530235 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.423e-7■■□□□ 13.9
RBM4-211ENST00000530235 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
RBM4-211ENST00000530235 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
RBM4-211ENST00000530235 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
RBM4-211ENST00000530235 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
RBM4-211ENST00000530235 RAD54L2Q9Y4B4 1467 aa23.74■■□□□ 1.39
RBM4-211ENST00000530235 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
RBM4-211ENST00000530235 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
RBM4-211ENST00000530235 SNAPC4Q5SXM2 1469 aa23.68■■□□□ 1.38
RBM4-211ENST00000530235 SOGA1O94964 1423 aa23.66■■□□□ 1.38
RBM4-211ENST00000530235 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
RBM4-211ENST00000530235 SYNJ1O43426 1573 aa23.64■■□□□ 1.37
RBM4-211ENST00000530235 CHMP7Q8WUX9 453 aaPredicted RBP23.61■■□□□ 1.37
RBM4-211ENST00000530235 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
RBM4-211ENST00000530235 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
RBM4-211ENST00000530235 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
RBM4-211ENST00000530235 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
RBM4-211ENST00000530235 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
RBM4-211ENST00000530235 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
RBM4-211ENST00000530235 CUX1P39880 1505 aa23.48■■□□□ 1.35
RBM4-211ENST00000530235 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
RBM4-211ENST00000530235 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
RBM4-211ENST00000530235 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
RBM4-211ENST00000530235 ABCA10Q8WWZ4 1543 aa23.24■■□□□ 1.31
RBM4-211ENST00000530235 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
RBM4-211ENST00000530235 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
RBM4-211ENST00000530235 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
RBM4-211ENST00000530235 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
RBM4-211ENST00000530235 NUP160Q12769 1436 aa23.11■■□□□ 1.29
RBM4-211ENST00000530235 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
RBM4-211ENST00000530235 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.28
RBM4-211ENST00000530235 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
RBM4-211ENST00000530235 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
RBM4-211ENST00000530235 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
RBM4-211ENST00000530235 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
RBM4-211ENST00000530235 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
RBM4-211ENST00000530235 FAM69CQ0P6D2 419 aa22.92■■□□□ 1.26
RBM4-211ENST00000530235 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms