RNA–Protein interactions for RNA: ENST00000578778.5

RBM4-213, Transcript of RNA binding motif protein 4, humanhuman

TSL 4 BASIC

Gene RBM4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-213ENST00000578778 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
RBM4-213ENST00000578778 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
RBM4-213ENST00000578778 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
RBM4-213ENST00000578778 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
RBM4-213ENST00000578778 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
RBM4-213ENST00000578778 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
RBM4-213ENST00000578778 ABCC9O60706 1549 aa13.71□□□□□ -0.21
RBM4-213ENST00000578778 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
RBM4-213ENST00000578778 NACADO15069 1562 aa13.55□□□□□ -0.24
RBM4-213ENST00000578778 SCRIBQ14160 1630 aa13.45□□□□□ -0.26
RBM4-213ENST00000578778 RB1CC1Q8TDY2 1594 aa13.44□□□□□ -0.26
RBM4-213ENST00000578778 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
RBM4-213ENST00000578778 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
RBM4-213ENST00000578778 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
RBM4-213ENST00000578778 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
RBM4-213ENST00000578778 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
RBM4-213ENST00000578778 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
RBM4-213ENST00000578778 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
RBM4-213ENST00000578778 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
RBM4-213ENST00000578778 WIZO95785 1651 aa12.89□□□□□ -0.35
RBM4-213ENST00000578778 SMARCA4P51532 1647 aa12.88□□□□□ -0.35
RBM4-213ENST00000578778 CHIC1Q5VXU3 224 aa12.78□□□□□ -0.36
RBM4-213ENST00000578778 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
RBM4-213ENST00000578778 PEG3Q9GZU2 1588 aa12.66□□□□□ -0.38
RBM4-213ENST00000578778 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
RBM4-213ENST00000578778 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
RBM4-213ENST00000578778 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
RBM4-213ENST00000578778 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
RBM4-213ENST00000578778 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
RBM4-213ENST00000578778 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
RBM4-213ENST00000578778 AEBP2Q6ZN18 517 aaPredicted RBP12.48□□□□□ -0.41
RBM4-213ENST00000578778 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
RBM4-213ENST00000578778 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
RBM4-213ENST00000578778 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
RBM4-213ENST00000578778 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
RBM4-213ENST00000578778 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
RBM4-213ENST00000578778 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
RBM4-213ENST00000578778 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
RBM4-213ENST00000578778 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
RBM4-213ENST00000578778 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
RBM4-213ENST00000578778 CFTRP13569 1480 aa12.21□□□□□ -0.45
RBM4-213ENST00000578778 EEA1Q15075 1411 aa12.18□□□□□ -0.46
RBM4-213ENST00000578778 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
RBM4-213ENST00000578778 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
RBM4-213ENST00000578778 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
RBM4-213ENST00000578778 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
RBM4-213ENST00000578778 SOGA1O94964 1423 aa12.14□□□□□ -0.47
RBM4-213ENST00000578778 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
RBM4-213ENST00000578778 RUSC2Q8N2Y8 1516 aa12.11□□□□□ -0.47
RBM4-213ENST00000578778 CUX1P39880 1505 aa12.09□□□□□ -0.47
RBM4-213ENST00000578778 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
RBM4-213ENST00000578778 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
RBM4-213ENST00000578778 NESP48681 1621 aa12.04□□□□□ -0.48
RBM4-213ENST00000578778 UBTFP17480 764 aaKnown RBP12.02□□□□□ -0.49
RBM4-213ENST00000578778 GOLGA3Q08378 1498 aa12.02□□□□□ -0.49
RBM4-213ENST00000578778 KIF21BO75037 1637 aa12.01□□□□□ -0.49
RBM4-213ENST00000578778 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
RBM4-213ENST00000578778 DNMBPQ6XZF7 1577 aa11.98□□□□□ -0.49
RBM4-213ENST00000578778 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
RBM4-213ENST00000578778 TNIKQ9UKE5 1360 aa11.98□□□□□ -0.49
RBM4-213ENST00000578778 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
RBM4-213ENST00000578778 FGD5Q6ZNL6 1462 aa11.97□□□□□ -0.49
RBM4-213ENST00000578778 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
RBM4-213ENST00000578778 KIF21AQ7Z4S6 1674 aa11.95□□□□□ -0.5
RBM4-213ENST00000578778 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
RBM4-213ENST00000578778 CUX2O14529 1486 aa11.92□□□□□ -0.5
RBM4-213ENST00000578778 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
RBM4-213ENST00000578778 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
RBM4-213ENST00000578778 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
RBM4-213ENST00000578778 PCGF6Q9BYE7 350 aa11.89□□□□□ -0.51
RBM4-213ENST00000578778 URB2Q14146 1524 aaKnown RBP11.88□□□□□ -0.51
RBM4-213ENST00000578778 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
RBM4-213ENST00000578778 TRIM26Q12899 539 aaPredicted RBP11.86□□□□□ -0.51
RBM4-213ENST00000578778 PRXQ9BXM0 1461 aa11.86□□□□□ -0.51
RBM4-213ENST00000578778 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
RBM4-213ENST00000578778 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
RBM4-213ENST00000578778 CLIP1P30622 1438 aa11.83□□□□□ -0.52
RBM4-213ENST00000578778 MRC2Q9UBG0 1479 aa11.82□□□□□ -0.52
RBM4-213ENST00000578778 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
RBM4-213ENST00000578778 IGF1RP08069 1367 aa11.8□□□□□ -0.52
RBM4-213ENST00000578778 RANGAP1P46060 587 aaPredicted RBP11.8□□□□□ -0.52
RBM4-213ENST00000578778 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
RBM4-213ENST00000578778 CUL7Q14999 1698 aa11.78□□□□□ -0.52
RBM4-213ENST00000578778 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
RBM4-213ENST00000578778 PPARGC1BQ86YN6 1023 aaKnown RBP11.77□□□□□ -0.53
RBM4-213ENST00000578778 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
RBM4-213ENST00000578778 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
RBM4-213ENST00000578778 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
RBM4-213ENST00000578778 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
RBM4-213ENST00000578778 WDR62O43379 1518 aa11.72□□□□□ -0.53
RBM4-213ENST00000578778 VPS8Q8N3P4 1428 aa11.72□□□□□ -0.53
RBM4-213ENST00000578778 APLP2Q06481 763 aa11.72□□□□□ -0.53
RBM4-213ENST00000578778 PBRM1Q86U86 1689 aa11.71□□□□□ -0.53
RBM4-213ENST00000578778 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
RBM4-213ENST00000578778 TTBK1Q5TCY1 1321 aaPredicted RBP11.68□□□□□ -0.54
RBM4-213ENST00000578778 IFT140Q96RY7 1462 aa11.68□□□□□ -0.54
RBM4-213ENST00000578778 THOC2Q8NI27 1593 aaKnown RBP11.67□□□□□ -0.54
RBM4-213ENST00000578778 ARAP1Q96P48 1450 aa11.67□□□□□ -0.54
RBM4-213ENST00000578778 ARHGAP35Q9NRY4 1499 aa11.64□□□□□ -0.55
RBM4-213ENST00000578778 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.553e-7■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms