RNA–Protein interactions for RNA: ENST00000432786.5

ARPC1A-202, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 5

Gene ARPC1A, Length 1,516 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-202ENST00000432786 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
ARPC1A-202ENST00000432786 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
ARPC1A-202ENST00000432786 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
ARPC1A-202ENST00000432786 DCAF1Q9Y4B6 1507 aa27.95■■■□□ 2.06
ARPC1A-202ENST00000432786 ABCC9O60706 1549 aa27.92■■■□□ 2.06
ARPC1A-202ENST00000432786 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
ARPC1A-202ENST00000432786 NACADO15069 1562 aa27.54■■■□□ 2
ARPC1A-202ENST00000432786 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
ARPC1A-202ENST00000432786 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
ARPC1A-202ENST00000432786 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
ARPC1A-202ENST00000432786 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
ARPC1A-202ENST00000432786 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
ARPC1A-202ENST00000432786 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
ARPC1A-202ENST00000432786 PABPN1Q86U42 306 aaKnown RBP eCLIP26.16■■□□□ 1.78
ARPC1A-202ENST00000432786 CECR2Q9BXF3 1484 aa26.1■■□□□ 1.77
ARPC1A-202ENST00000432786 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
ARPC1A-202ENST00000432786 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
ARPC1A-202ENST00000432786 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
ARPC1A-202ENST00000432786 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
ARPC1A-202ENST00000432786 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
ARPC1A-202ENST00000432786 WIZO95785 1651 aa25.76■■□□□ 1.71
ARPC1A-202ENST00000432786 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
ARPC1A-202ENST00000432786 EIF4G1Q04637 1599 aaKnown RBP25.71■■□□□ 1.71
ARPC1A-202ENST00000432786 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
ARPC1A-202ENST00000432786 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
ARPC1A-202ENST00000432786 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
ARPC1A-202ENST00000432786 HMGXB3Q12766 1538 aa25.39■■□□□ 1.65
ARPC1A-202ENST00000432786 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
ARPC1A-202ENST00000432786 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
ARPC1A-202ENST00000432786 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
ARPC1A-202ENST00000432786 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
ARPC1A-202ENST00000432786 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
ARPC1A-202ENST00000432786 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
ARPC1A-202ENST00000432786 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
ARPC1A-202ENST00000432786 CFTRP13569 1480 aa24.74■■□□□ 1.55
ARPC1A-202ENST00000432786 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
ARPC1A-202ENST00000432786 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
ARPC1A-202ENST00000432786 ABCC8Q09428 1581 aa24.57■■□□□ 1.52
ARPC1A-202ENST00000432786 NESP48681 1621 aa24.48■■□□□ 1.51
ARPC1A-202ENST00000432786 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
ARPC1A-202ENST00000432786 SYNJ1O43426 1573 aa24.41■■□□□ 1.5
ARPC1A-202ENST00000432786 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
ARPC1A-202ENST00000432786 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
ARPC1A-202ENST00000432786 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
ARPC1A-202ENST00000432786 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
ARPC1A-202ENST00000432786 KIF21AQ7Z4S6 1674 aa24.31■■□□□ 1.48
ARPC1A-202ENST00000432786 CUX1P39880 1505 aa24.3■■□□□ 1.48
ARPC1A-202ENST00000432786 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
ARPC1A-202ENST00000432786 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
ARPC1A-202ENST00000432786 DNMBPQ6XZF7 1577 aa24.2■■□□□ 1.46
ARPC1A-202ENST00000432786 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
ARPC1A-202ENST00000432786 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
ARPC1A-202ENST00000432786 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
ARPC1A-202ENST00000432786 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
ARPC1A-202ENST00000432786 EEA1Q15075 1411 aa24.02■■□□□ 1.44
ARPC1A-202ENST00000432786 SOGA1O94964 1423 aa24.01■■□□□ 1.43
ARPC1A-202ENST00000432786 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
ARPC1A-202ENST00000432786 WDR62O43379 1518 aa23.98■■□□□ 1.43
ARPC1A-202ENST00000432786 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
ARPC1A-202ENST00000432786 WDR97A6NE52 1622 aa23.95■■□□□ 1.42
ARPC1A-202ENST00000432786 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.42
ARPC1A-202ENST00000432786 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
ARPC1A-202ENST00000432786 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
ARPC1A-202ENST00000432786 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
ARPC1A-202ENST00000432786 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
ARPC1A-202ENST00000432786 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.4
ARPC1A-202ENST00000432786 KIF27Q86VH2 1401 aa23.83■■□□□ 1.4
ARPC1A-202ENST00000432786 CUX2O14529 1486 aa23.8■■□□□ 1.4
ARPC1A-202ENST00000432786 KIF21BO75037 1637 aa23.79■■□□□ 1.4
ARPC1A-202ENST00000432786 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
ARPC1A-202ENST00000432786 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
ARPC1A-202ENST00000432786 IFT140Q96RY7 1462 aa23.7■■□□□ 1.39
ARPC1A-202ENST00000432786 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
ARPC1A-202ENST00000432786 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
ARPC1A-202ENST00000432786 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
ARPC1A-202ENST00000432786 GOLGA3Q08378 1498 aa23.64■■□□□ 1.37
ARPC1A-202ENST00000432786 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
ARPC1A-202ENST00000432786 IGF1RP08069 1367 aa23.62■■□□□ 1.37
ARPC1A-202ENST00000432786 CUL7Q14999 1698 aa23.62■■□□□ 1.37
ARPC1A-202ENST00000432786 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
ARPC1A-202ENST00000432786 RAPGEF2Q9Y4G8 1499 aa23.57■■□□□ 1.36
ARPC1A-202ENST00000432786 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
ARPC1A-202ENST00000432786 EIF4G3O43432 1585 aaKnown RBP23.55■■□□□ 1.36
ARPC1A-202ENST00000432786 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
ARPC1A-202ENST00000432786 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
ARPC1A-202ENST00000432786 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
ARPC1A-202ENST00000432786 AQRO60306 1485 aaKnown RBP eCLIP23.48■■□□□ 1.357e-6■■■□□ 14.6
ARPC1A-202ENST00000432786 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
ARPC1A-202ENST00000432786 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
ARPC1A-202ENST00000432786 EHMT2Q96KQ7 1210 aa23.4■■□□□ 1.34
ARPC1A-202ENST00000432786 FHAD1B1AJZ9 1412 aa23.35■■□□□ 1.33
ARPC1A-202ENST00000432786 CTTNBP2Q8WZ74 1663 aa23.35■■□□□ 1.33
ARPC1A-202ENST00000432786 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
ARPC1A-202ENST00000432786 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
ARPC1A-202ENST00000432786 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
ARPC1A-202ENST00000432786 SNAPC4Q5SXM2 1469 aa23.31■■□□□ 1.32
ARPC1A-202ENST00000432786 SYNJ2O15056 1496 aa23.21■■□□□ 1.31
ARPC1A-202ENST00000432786 CLIP1P30622 1438 aa23.2■■□□□ 1.31
ARPC1A-202ENST00000432786 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
ARPC1A-202ENST00000432786 CHD1O14646 1710 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms